BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040401
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30147.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group] g...   119   3e-25
ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23

>emb|CBI30147.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  136 bits (343), Expect = 2e-30
 Identities = 59/103 (57%), Positives = 83/103 (80%)
 Frame = +3

Query: 3   VKEAYDFIKEMPLDPNSVIWRSLLGSCKIHGNIEVGVIAAERLLKVDPDHGARYVVLSNM 182
           ++EAYD +++MP + NSVIWR+LL +C+ HGN+++G IA ++LL+++  HGARYV+LSN+
Sbjct: 288 LEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNI 347

Query: 183 LTDANRWEDAGRVRKLMEAKGISKPRGWSCIEANGTLHRFQAS 311
           L DAN+WE+A +VRK+ME  GI KP GWS IE  G +HRF AS
Sbjct: 348 LADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVAS 390


>ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  136 bits (343), Expect = 2e-30
 Identities = 59/103 (57%), Positives = 83/103 (80%)
 Frame = +3

Query: 3   VKEAYDFIKEMPLDPNSVIWRSLLGSCKIHGNIEVGVIAAERLLKVDPDHGARYVVLSNM 182
           ++EAYD +++MP + NSVIWR+LL +C+ HGN+++G IA ++LL+++  HGARYV+LSN+
Sbjct: 503 LEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNI 562

Query: 183 LTDANRWEDAGRVRKLMEAKGISKPRGWSCIEANGTLHRFQAS 311
           L DAN+WE+A +VRK+ME  GI KP GWS IE  G +HRF AS
Sbjct: 563 LADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVAS 605


>ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
           gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|113531711|dbj|BAF04094.1|
           Os01g0176300 [Oryza sativa Japonica Group]
           gi|125569234|gb|EAZ10749.1| hypothetical protein
           OsJ_00586 [Oryza sativa Japonica Group]
          Length = 665

 Score =  119 bits (297), Expect = 3e-25
 Identities = 53/103 (51%), Positives = 75/103 (72%)
 Frame = +3

Query: 3   VKEAYDFIKEMPLDPNSVIWRSLLGSCKIHGNIEVGVIAAERLLKVDPDHGARYVVLSNM 182
           +KEA D I +MP+ PNS IW +LL SC+++GN E+G +AAERLL++DPD+   Y++LSNM
Sbjct: 446 LKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNM 505

Query: 183 LTDANRWEDAGRVRKLMEAKGISKPRGWSCIEANGTLHRFQAS 311
              +NRW+D  R+R+++  KGI K  G S IE NG +H F A+
Sbjct: 506 YAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAA 548


>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/100 (53%), Positives = 72/100 (72%)
 Frame = +3

Query: 3   VKEAYDFIKEMPLDPNSVIWRSLLGSCKIHGNIEVGVIAAERLLKVDPDHGARYVVLSNM 182
           ++EA + ++ MPL PN +IW SL+ +C++HG IE+G  AA+RLL++DPDH   +V LSN+
Sbjct: 508 LREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNI 567

Query: 183 LTDANRWEDAGRVRKLMEAKGISKPRGWSCIEANGTLHRF 302
              A RWED G+VRKLM+ KGISK RG S  E N  +H F
Sbjct: 568 YAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEF 607


>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/102 (49%), Positives = 71/102 (69%)
 Frame = +3

Query: 3   VKEAYDFIKEMPLDPNSVIWRSLLGSCKIHGNIEVGVIAAERLLKVDPDHGARYVVLSNM 182
           ++EA++FI  MP+ PN V+W +LLG CK+H NI++   A + L ++DP +   YVV+SN+
Sbjct: 295 LEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNI 354

Query: 183 LTDANRWEDAGRVRKLMEAKGISKPRGWSCIEANGTLHRFQA 308
             +A RWEDA RVRKLM+ +G+ K  GWS I  NG +H F A
Sbjct: 355 YAEAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVA 396