BLASTX nr result

ID: Coptis23_contig00040391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040391
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547844.1| PREDICTED: probable leucine-rich repeat rece...   120   1e-25
ref|NP_178080.2| leucine-rich repeat protein kinase-like protein...   115   3e-24
ref|XP_002889259.1| hypothetical protein ARALYDRAFT_477135 [Arab...   115   5e-24
ref|XP_002323702.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002326254.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24

>ref|XP_003547844.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At5g49770-like [Glycine max]
          Length = 967

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/91 (63%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = -1

Query: 270 LSFSYKIILILKGNPLCVGHLSNASFCQLQQEQK-PYSTSLAKCGSKSCASNQKLNPQTC 94
           L   YK ILIL GNP+C   LSN +FCQLQQ+ K PYSTSLA CG KSC  +QKL+PQ+C
Sbjct: 378 LRSQYKNILILIGNPVCGTALSNTNFCQLQQQAKQPYSTSLASCGGKSCPPDQKLSPQSC 437

Query: 93  DCAYPYEGKMYFRAPFFRDLSDATFFKELEM 1
           +CAYPYEG +YFR P FR+LS    F  LEM
Sbjct: 438 ECAYPYEGTLYFRGPSFRELSSVNTFHSLEM 468


>ref|NP_178080.2| leucine-rich repeat protein kinase-like protein [Arabidopsis
           thaliana] gi|26450791|dbj|BAC42504.1| unknown protein
           [Arabidopsis thaliana] gi|224589491|gb|ACN59279.1|
           leucine-rich repeat receptor-like protein kinase
           [Arabidopsis thaliana] gi|332198152|gb|AEE36273.1|
           leucine-rich repeat protein kinase-like protein
           [Arabidopsis thaliana]
          Length = 971

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/92 (57%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
 Frame = -1

Query: 270 LSFSYKIILILKGNPLCVGHLSNASFCQLQQEQ--KPYSTSLAKCGSKSCASNQKLNPQT 97
           LS  Y   LIL+GNP+C   LSN ++CQ+QQ+Q  + YSTSLA CG KSC  +QK++PQ+
Sbjct: 386 LSSGYTNTLILEGNPVCTTALSNTNYCQIQQQQVKRIYSTSLANCGGKSCPLDQKVSPQS 445

Query: 96  CDCAYPYEGKMYFRAPFFRDLSDATFFKELEM 1
           C+CAYPYEG +YFR P FRDLS+   +  LEM
Sbjct: 446 CECAYPYEGTLYFRGPMFRDLSNVNTYHSLEM 477


>ref|XP_002889259.1| hypothetical protein ARALYDRAFT_477135 [Arabidopsis lyrata subsp.
           lyrata] gi|297335100|gb|EFH65518.1| hypothetical protein
           ARALYDRAFT_477135 [Arabidopsis lyrata subsp. lyrata]
          Length = 971

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/92 (57%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
 Frame = -1

Query: 270 LSFSYKIILILKGNPLCVGHLSNASFCQLQQEQ--KPYSTSLAKCGSKSCASNQKLNPQT 97
           LS  Y   LIL GNP+C   LSN ++CQ+QQ+Q  + YSTSLA CG KSC  +QK++PQ+
Sbjct: 386 LSSGYTNTLILVGNPVCTTALSNTNYCQIQQQQVKRIYSTSLANCGGKSCPLDQKISPQS 445

Query: 96  CDCAYPYEGKMYFRAPFFRDLSDATFFKELEM 1
           C+CAYPYEG +YFR P FRDLS+   +  LEM
Sbjct: 446 CECAYPYEGTLYFRGPMFRDLSNVNTYHSLEM 477


>ref|XP_002323702.1| predicted protein [Populus trichocarpa] gi|222868332|gb|EEF05463.1|
           predicted protein [Populus trichocarpa]
          Length = 946

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = -1

Query: 270 LSFSYKIILILKGNPLCVGHLSNASFCQLQQEQ-KPYSTSLAKCGSKSCASNQKLNPQTC 94
           L+  Y   LIL GNP+C   LS+ ++CQLQQ+  KPYSTSLA CGSK C   QKL+PQ+C
Sbjct: 350 LTADYTNTLILVGNPVCTA-LSDTNYCQLQQQSTKPYSTSLANCGSKMCPPEQKLSPQSC 408

Query: 93  DCAYPYEGKMYFRAPFFRDLSDATFFKELEM 1
           +CAYPYEG +YFRAP FR+LS+   F  LEM
Sbjct: 409 ECAYPYEGTLYFRAPSFRELSNVNMFHSLEM 439


>ref|XP_002326254.1| predicted protein [Populus trichocarpa] gi|222833447|gb|EEE71924.1|
           predicted protein [Populus trichocarpa]
          Length = 974

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = -1

Query: 270 LSFSYKIILILKGNPLCVGHLSNASFCQLQQEQ-KPYSTSLAKCGSKSCASNQKLNPQTC 94
           L+  Y   LIL GNP+C+  LSN S+CQLQQ+  KPYSTSLA CGSK C   QKL+PQ+C
Sbjct: 382 LTADYTNRLILVGNPVCIA-LSNTSYCQLQQQSTKPYSTSLANCGSKLCPIEQKLSPQSC 440

Query: 93  DCAYPYEGKMYFRAPFFRDLSDATFFKELEM 1
           +CAYPYEG +YFR P FR+LS+   F  LEM
Sbjct: 441 ECAYPYEGTLYFRGPSFRELSNDNTFHSLEM 471


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