BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040377
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    91   1e-16
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    91   1e-16
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    91   1e-16
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    88   8e-16
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    87   1e-15

>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/67 (61%), Positives = 52/67 (77%)
 Frame = +2

Query: 26   EKVIPERGIRQGDPLSPYLFILVAEAFSRLIALAEDEGSIFGIKIRSKAPGISHILYADD 205
            E   PERG+RQGDPLSPYLF+L AE FS L++  E+EG + GI+I   AP +SH+L+ADD
Sbjct: 826  ESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADD 885

Query: 206  SLIFCKA 226
            SLI C+A
Sbjct: 886  SLILCRA 892


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/67 (61%), Positives = 52/67 (77%)
 Frame = +2

Query: 26   EKVIPERGIRQGDPLSPYLFILVAEAFSRLIALAEDEGSIFGIKIRSKAPGISHILYADD 205
            E   PERG+RQGDPLSPYLF+L AE FS L++  E+EG + GI+I   AP +SH+L+ADD
Sbjct: 854  ESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADD 913

Query: 206  SLIFCKA 226
            SLI C+A
Sbjct: 914  SLILCRA 920


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/67 (61%), Positives = 52/67 (77%)
 Frame = +2

Query: 26   EKVIPERGIRQGDPLSPYLFILVAEAFSRLIALAEDEGSIFGIKIRSKAPGISHILYADD 205
            E   PERG+RQGDPLSPYLF+L AE FS L++  E+EG + GI+I   AP +SH+L+ADD
Sbjct: 822  ESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADD 881

Query: 206  SLIFCKA 226
            SLI C+A
Sbjct: 882  SLILCRA 888


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = +2

Query: 26   EKVIPERGIRQGDPLSPYLFILVAEAFSRLIALAEDEGSIFGIKIRSKAPGISHILYADD 205
            E   P RG+RQGDPLSPYLF+L AE FS L++  E+EG + GI+I   AP +SH+L+ADD
Sbjct: 881  ESFSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADD 940

Query: 206  SLIFCKA 226
            SLI C+A
Sbjct: 941  SLILCRA 947


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/69 (57%), Positives = 49/69 (71%)
 Frame = +2

Query: 20   PLEKVIPERGIRQGDPLSPYLFILVAEAFSRLIALAEDEGSIFGIKIRSKAPGISHILYA 199
            P  K+ P RG+RQGDP+SPYLF++VAE  S LI  AE E  I G+ I   AP +SH+ YA
Sbjct: 911  PFGKIKPSRGLRQGDPISPYLFLIVAEGLSALIRKAEREQQIHGVAIARGAPSVSHLFYA 970

Query: 200  DDSLIFCKA 226
            DDSL+FC A
Sbjct: 971  DDSLLFCDA 979