BLASTX nr result

ID: Coptis23_contig00040367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040367
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40096.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TA...   165   3e-39
ref|XP_003543068.1| PREDICTED: tRNA-specific adenosine deaminase...   161   5e-38
ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase...   160   8e-38
ref|XP_003550645.1| PREDICTED: tRNA-specific adenosine deaminase...   160   1e-37

>emb|CBI40096.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  166 bits (419), Expect = 2e-39
 Identities = 86/160 (53%), Positives = 105/160 (65%)
 Frame = +1

Query: 25  SNLEMASCEEEDSAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASGXXXXXXXX 204
           S ++MAS  EE+   TLAFME A+QQAKLALD+ EVP+GCV VED K+IA+G        
Sbjct: 12  SPVQMASLGEENLPGTLAFMELAIQQAKLALDSLEVPVGCVIVEDGKLIATGRNRTTETR 71

Query: 205 XXXXXXXMEAIDGLLKNWQESGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVY 384
                  MEAID LL+ WQ++GLS +E+   FS+C LYVTCEPCIMCA++LSI+GI+ VY
Sbjct: 72  NATRHAEMEAIDVLLEQWQKNGLSKLEVAEIFSKCSLYVTCEPCIMCAASLSILGIKEVY 131

Query: 385 YGCANDRFGGCGXXXXXXXXXXXXXXXXXXXQGKSFKCTG 504
           YGCAND+FGGCG                     K FKCTG
Sbjct: 132 YGCANDKFGGCGSILSLHSSSSKLLTSGTPLV-KGFKCTG 170


>ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus
           communis] gi|223529101|gb|EEF31082.1| tRNA-specific
           adenosine deaminase subunit TAD2, putative [Ricinus
           communis]
          Length = 223

 Score =  165 bits (418), Expect = 3e-39
 Identities = 85/167 (50%), Positives = 102/167 (61%)
 Frame = +1

Query: 4   RSNLDSSSNLEMASCEEEDSAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASGX 183
           R  ++    +E+ S E      T A+ME A++QA+ ALD+ EVP+GCV VED KVIASG 
Sbjct: 27  REKINMECQVELCSSE------TFAYMELALEQARHALDSLEVPVGCVIVEDGKVIASGR 80

Query: 184 XXXXXXXXXXXXXXMEAIDGLLKNWQESGLSAIEIEGKFSRCDLYVTCEPCIMCASALSI 363
                         MEAID LL+ WQ+ GLS  E+  KFS+C LYVTCEPCIMCA+ALSI
Sbjct: 81  NRTTETRNATRHAEMEAIDVLLEQWQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSI 140

Query: 364 IGIRAVYYGCANDRFGGCGXXXXXXXXXXXXXXXXXXXQGKSFKCTG 504
           +GI  VYYGCAND+FGGCG                   QGK FKCTG
Sbjct: 141 LGIEEVYYGCANDKFGGCGSILPLHSSSTQSLTSGVVAQGKGFKCTG 187


>ref|XP_003543068.1| PREDICTED: tRNA-specific adenosine deaminase 2 [Glycine max]
          Length = 182

 Score =  161 bits (408), Expect = 5e-38
 Identities = 85/148 (57%), Positives = 95/148 (64%)
 Frame = +1

Query: 61  SAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASGXXXXXXXXXXXXXXXMEAID 240
           S+ TLAFME A+QQAKLALD  EVP+GCV VED KVIASG               MEAID
Sbjct: 3   SSETLAFMELAIQQAKLALDVLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAID 62

Query: 241 GLLKNWQESGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGCANDRFGGCG 420
            LL  WQ+ GLS  E+  KFS C LYVTCEPCIMCASALSI+GI+ V+YGC+ND+FGGCG
Sbjct: 63  VLLGQWQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCG 122

Query: 421 XXXXXXXXXXXXXXXXXXXQGKSFKCTG 504
                               GK FKCTG
Sbjct: 123 -SILSLHLSNTAPLNNEVPSGKCFKCTG 149


>ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Cucumis
           sativus]
          Length = 191

 Score =  160 bits (406), Expect = 8e-38
 Identities = 85/155 (54%), Positives = 98/155 (63%)
 Frame = +1

Query: 37  MASCEEEDSAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASGXXXXXXXXXXXX 216
           M S  E+ S+ TL FME A+QQAKLAL+N EVP+GCV VED  VIA+G            
Sbjct: 1   MDSSVEDCSSDTLRFMELAIQQAKLALNNLEVPVGCVIVEDGMVIATGRNRTTETRNATR 60

Query: 217 XXXMEAIDGLLKNWQESGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGCA 396
              MEAID L++ WQ  GLS  E+  KFS+C LYVTCEPCIMCASALSIIGI+ VYYGCA
Sbjct: 61  HAEMEAIDILIEAWQRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSIIGIKEVYYGCA 120

Query: 397 NDRFGGCGXXXXXXXXXXXXXXXXXXXQGKSFKCT 501
           ND+FGGCG                    G+ FKCT
Sbjct: 121 NDKFGGCGSILSLHLGSGEAPTSGNGL-GRGFKCT 154


>ref|XP_003550645.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Glycine max]
          Length = 182

 Score =  160 bits (404), Expect = 1e-37
 Identities = 83/148 (56%), Positives = 94/148 (63%)
 Frame = +1

Query: 61  SAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASGXXXXXXXXXXXXXXXMEAID 240
           S  TL FME A+QQAKLALD  EVP+GCV VED+KVIASG               MEA+D
Sbjct: 3   SPETLTFMELAIQQAKLALDVLEVPVGCVIVEDDKVIASGRNRTTQTRNATRHAEMEAVD 62

Query: 241 GLLKNWQESGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGCANDRFGGCG 420
            LL  WQ+ GLS  E+  KFS C LYVTCEPCIMCASALSI+GI+ V+YGC+ND+FGGCG
Sbjct: 63  VLLGQWQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCG 122

Query: 421 XXXXXXXXXXXXXXXXXXXQGKSFKCTG 504
                               GK FKCTG
Sbjct: 123 -SILSLHLSNTTPLNNEVSPGKCFKCTG 149


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