BLASTX nr result

ID: Coptis23_contig00040341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040341
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002517807.1| conserved hypothetical protein [Ricinus comm...    86   3e-15
gb|EAY89056.1| hypothetical protein OsI_10540 [Oryza sativa Indi...    77   1e-12
ref|NP_001173314.1| Os03g0217000 [Oryza sativa Japonica Group] g...    77   1e-12
gb|AFK47750.1| unknown [Lotus japonicus]                               76   3e-12

>ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|222850453|gb|EEE88000.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/53 (81%), Positives = 50/53 (94%)
 Frame = -3

Query: 286 LENFGKRLKDSMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISMLKQ 128
           +ENFGK LKD++SPK KGDWKDV+LMS+SFAVYVYMSQKIV AYC+W+SMLKQ
Sbjct: 65  VENFGKGLKDNLSPKRKGDWKDVMLMSLSFAVYVYMSQKIVCAYCAWMSMLKQ 117


>ref|XP_002517807.1| conserved hypothetical protein [Ricinus communis]
           gi|223543079|gb|EEF44614.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/52 (73%), Positives = 46/52 (88%)
 Frame = -3

Query: 283 ENFGKRLKDSMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISMLKQ 128
           E F K +KD++SPK KGDWKDV+LMS+SFAVYVY+SQ+IV AYC+W SMLKQ
Sbjct: 67  EKFAKGVKDNLSPKQKGDWKDVVLMSLSFAVYVYISQQIVCAYCAWTSMLKQ 118


>gb|EAY89056.1| hypothetical protein OsI_10540 [Oryza sativa Indica Group]
          Length = 143

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/47 (70%), Positives = 41/47 (87%)
 Frame = -3

Query: 274 GKRLKDSMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISML 134
           G+ +++S+SPK KGDWKDV LMS SFAVYVY+SQKIV  YC+WISM+
Sbjct: 95  GRAVRESLSPKQKGDWKDVTLMSFSFAVYVYISQKIVCTYCAWISMI 141


>ref|NP_001173314.1| Os03g0217000 [Oryza sativa Japonica Group]
           gi|108706860|gb|ABF94655.1| expressed protein [Oryza
           sativa Japonica Group] gi|125585410|gb|EAZ26074.1|
           hypothetical protein OsJ_09928 [Oryza sativa Japonica
           Group] gi|255674313|dbj|BAH92042.1| Os03g0217000 [Oryza
           sativa Japonica Group]
          Length = 143

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/47 (70%), Positives = 41/47 (87%)
 Frame = -3

Query: 274 GKRLKDSMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISML 134
           G+ +++S+SPK KGDWKDV LMS SFAVYVY+SQKIV  YC+WISM+
Sbjct: 95  GRAVRESLSPKQKGDWKDVTLMSFSFAVYVYISQKIVCTYCAWISMI 141


>gb|AFK47750.1| unknown [Lotus japonicus]
          Length = 123

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = -3

Query: 283 ENFGKRLKDSMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISMLK 131
           E  GKR + ++SPK KGDWKD+ LMSISFA+YVY+SQK+V AYC+W S+ K
Sbjct: 70  EKLGKRPEQNLSPKQKGDWKDLFLMSISFALYVYISQKLVCAYCAWTSLPK 120


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