BLASTX nr result
ID: Coptis23_contig00040317
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00040317 (354 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACJ85835.1| unknown [Medicago truncatula] gi|388523125|gb|AFK... 72 5e-11 ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-11 gb|AFK44336.1| unknown [Lotus japonicus] 70 1e-10 ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin... 70 2e-10 ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23... 70 2e-10 >gb|ACJ85835.1| unknown [Medicago truncatula] gi|388523125|gb|AFK49624.1| unknown [Medicago truncatula] Length = 327 Score = 72.0 bits (175), Expect = 5e-11 Identities = 31/52 (59%), Positives = 45/52 (86%) Frame = +2 Query: 188 LPGEIIEDILSRLPVKSLVQFKCVSKSWRSLISDPCFIETHLHRSNKSSNRL 343 LPG++I ++LS LPVKSLV+FKCV+K+W++LISDP F++ HL+RS+ + N L Sbjct: 9 LPGDLIAELLSFLPVKSLVRFKCVNKAWKTLISDPTFVKLHLNRSSSTRNPL 60 >ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1| predicted protein [Populus trichocarpa] Length = 374 Score = 71.6 bits (174), Expect = 6e-11 Identities = 33/50 (66%), Positives = 41/50 (82%) Frame = +2 Query: 188 LPGEIIEDILSRLPVKSLVQFKCVSKSWRSLISDPCFIETHLHRSNKSSN 337 LP EII +ILSRLPVK LV+FKCVSK+WRSLIS P F++ HL R+ + +N Sbjct: 8 LPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTN 57 >gb|AFK44336.1| unknown [Lotus japonicus] Length = 193 Score = 70.5 bits (171), Expect = 1e-10 Identities = 32/57 (56%), Positives = 43/57 (75%) Frame = +2 Query: 164 QVKEIQSILPGEIIEDILSRLPVKSLVQFKCVSKSWRSLISDPCFIETHLHRSNKSS 334 Q + + LP E++ +ILSRLPVKSL++F+CV KSW LISDP FI+ HLH S +S+ Sbjct: 55 QAMAVATFLPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHLSKQST 111 >ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max] gi|255637050|gb|ACU18857.1| unknown [Glycine max] Length = 406 Score = 70.1 bits (170), Expect = 2e-10 Identities = 31/50 (62%), Positives = 42/50 (84%) Frame = +2 Query: 188 LPGEIIEDILSRLPVKSLVQFKCVSKSWRSLISDPCFIETHLHRSNKSSN 337 LP E++ +ILSRLPVKSL+QF+CV KSW SLISDP F++ HLH S++ ++ Sbjct: 49 LPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTH 98 >ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max] Length = 405 Score = 69.7 bits (169), Expect = 2e-10 Identities = 31/50 (62%), Positives = 42/50 (84%) Frame = +2 Query: 188 LPGEIIEDILSRLPVKSLVQFKCVSKSWRSLISDPCFIETHLHRSNKSSN 337 LP E++ +ILSRLPVKSL+QF+CV KSW SLI DP F++ HLH S++S++ Sbjct: 49 LPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTH 98