BLASTX nr result

ID: Coptis23_contig00040317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040317
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ85835.1| unknown [Medicago truncatula] gi|388523125|gb|AFK...    72   5e-11
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
gb|AFK44336.1| unknown [Lotus japonicus]                               70   1e-10
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    70   2e-10
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    70   2e-10

>gb|ACJ85835.1| unknown [Medicago truncatula] gi|388523125|gb|AFK49624.1| unknown
           [Medicago truncatula]
          Length = 327

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/52 (59%), Positives = 45/52 (86%)
 Frame = +2

Query: 188 LPGEIIEDILSRLPVKSLVQFKCVSKSWRSLISDPCFIETHLHRSNKSSNRL 343
           LPG++I ++LS LPVKSLV+FKCV+K+W++LISDP F++ HL+RS+ + N L
Sbjct: 9   LPGDLIAELLSFLPVKSLVRFKCVNKAWKTLISDPTFVKLHLNRSSSTRNPL 60


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/50 (66%), Positives = 41/50 (82%)
 Frame = +2

Query: 188 LPGEIIEDILSRLPVKSLVQFKCVSKSWRSLISDPCFIETHLHRSNKSSN 337
           LP EII +ILSRLPVK LV+FKCVSK+WRSLIS P F++ HL R+ + +N
Sbjct: 8   LPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTN 57


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/57 (56%), Positives = 43/57 (75%)
 Frame = +2

Query: 164 QVKEIQSILPGEIIEDILSRLPVKSLVQFKCVSKSWRSLISDPCFIETHLHRSNKSS 334
           Q   + + LP E++ +ILSRLPVKSL++F+CV KSW  LISDP FI+ HLH S +S+
Sbjct: 55  QAMAVATFLPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHLSKQST 111


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = +2

Query: 188 LPGEIIEDILSRLPVKSLVQFKCVSKSWRSLISDPCFIETHLHRSNKSSN 337
           LP E++ +ILSRLPVKSL+QF+CV KSW SLISDP F++ HLH S++ ++
Sbjct: 49  LPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTH 98


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = +2

Query: 188 LPGEIIEDILSRLPVKSLVQFKCVSKSWRSLISDPCFIETHLHRSNKSSN 337
           LP E++ +ILSRLPVKSL+QF+CV KSW SLI DP F++ HLH S++S++
Sbjct: 49  LPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTH 98


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