BLASTX nr result

ID: Coptis23_contig00040304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040304
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab...    54   1e-10
ref|XP_002893063.1| jacalin lectin family protein [Arabidopsis l...    54   1e-10
ref|NP_001185041.1| mannose-binding lectin-like protein [Arabido...    52   7e-10
ref|NP_849691.1| mannose-binding lectin-like protein [Arabidopsi...    52   7e-10
ref|NP_001117315.1| mannose-binding lectin-like protein [Arabido...    52   7e-10

>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
            lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
            ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
          Length = 1490

 Score = 53.9 bits (128), Expect(2) = 1e-10
 Identities = 25/38 (65%), Positives = 30/38 (78%), Gaps = 2/38 (5%)
 Frame = +1

Query: 55   LGFHGRSSLYLDAIGVHMQHWLGGGRP--SKSILQKIF 162
            LGFHGRSS +LDAIGVHMQHWLG  +P  S++   K+F
Sbjct: 1452 LGFHGRSSSHLDAIGVHMQHWLGNNKPYYSRASCFKLF 1489



 Score = 36.6 bits (83), Expect(2) = 1e-10
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +2

Query: 2    GEEIGTFFTSTTTEGKVL 55
            GEE GTFFTSTTT+GKVL
Sbjct: 1435 GEETGTFFTSTTTQGKVL 1452


>ref|XP_002893063.1| jacalin lectin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338905|gb|EFH69322.1| jacalin lectin family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 596

 Score = 53.9 bits (128), Expect(2) = 1e-10
 Identities = 25/38 (65%), Positives = 30/38 (78%), Gaps = 2/38 (5%)
 Frame = +1

Query: 55  LGFHGRSSLYLDAIGVHMQHWLGGGRP--SKSILQKIF 162
           LGFHGRSS +LDAIGVHMQHWLG  +P  S++   K+F
Sbjct: 558 LGFHGRSSSHLDAIGVHMQHWLGNNKPYYSRASCFKLF 595



 Score = 36.6 bits (83), Expect(2) = 1e-10
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   GEEIGTFFTSTTTEGKVL 55
           GEE GTFFTSTTT+GKVL
Sbjct: 541 GEETGTFFTSTTTQGKVL 558


>ref|NP_001185041.1| mannose-binding lectin-like protein [Arabidopsis thaliana]
           gi|332191769|gb|AEE29890.1| mannose-binding lectin-like
           protein [Arabidopsis thaliana]
          Length = 601

 Score = 51.6 bits (122), Expect(2) = 7e-10
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = +1

Query: 55  LGFHGRSSLYLDAIGVHMQHWLGGGR 132
           LGFHGRSS +LDAIGVHMQHWLG  +
Sbjct: 564 LGFHGRSSFHLDAIGVHMQHWLGNNK 589



 Score = 36.6 bits (83), Expect(2) = 7e-10
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   GEEIGTFFTSTTTEGKVL 55
           GEE GTFFTSTTT+GKVL
Sbjct: 547 GEETGTFFTSTTTQGKVL 564


>ref|NP_849691.1| mannose-binding lectin-like protein [Arabidopsis thaliana]
           gi|17064842|gb|AAL32575.1| Unknown protein [Arabidopsis
           thaliana] gi|19715576|gb|AAL91614.1| At1g19720/F14P1_33
           [Arabidopsis thaliana] gi|23197804|gb|AAN15429.1|
           Unknown protein [Arabidopsis thaliana]
           gi|332191767|gb|AEE29888.1| mannose-binding lectin-like
           protein [Arabidopsis thaliana]
          Length = 595

 Score = 51.6 bits (122), Expect(2) = 7e-10
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = +1

Query: 55  LGFHGRSSLYLDAIGVHMQHWLGGGR 132
           LGFHGRSS +LDAIGVHMQHWLG  +
Sbjct: 558 LGFHGRSSFHLDAIGVHMQHWLGNNK 583



 Score = 36.6 bits (83), Expect(2) = 7e-10
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   GEEIGTFFTSTTTEGKVL 55
           GEE GTFFTSTTT+GKVL
Sbjct: 541 GEETGTFFTSTTTQGKVL 558


>ref|NP_001117315.1| mannose-binding lectin-like protein [Arabidopsis thaliana]
           gi|10086506|gb|AAG12566.1|AC007797_26 Unknown protein
           [Arabidopsis thaliana] gi|332191768|gb|AEE29889.1|
           mannose-binding lectin-like protein [Arabidopsis
           thaliana]
          Length = 571

 Score = 51.6 bits (122), Expect(2) = 7e-10
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = +1

Query: 55  LGFHGRSSLYLDAIGVHMQHWLGGGR 132
           LGFHGRSS +LDAIGVHMQHWLG  +
Sbjct: 534 LGFHGRSSFHLDAIGVHMQHWLGNNK 559



 Score = 36.6 bits (83), Expect(2) = 7e-10
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   GEEIGTFFTSTTTEGKVL 55
           GEE GTFFTSTTT+GKVL
Sbjct: 517 GEETGTFFTSTTTQGKVL 534


Top