BLASTX nr result

ID: Coptis23_contig00040301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040301
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196006.1| malate synthase [Arabidopsis thaliana] gi|33418...   186   3e-50
emb|CAA73793.1| glyoxysomal malate synthase [Brassica napus]          186   3e-50
sp|P13244.1|MASY_BRANA RecName: Full=Malate synthase, glyoxysoma...   186   3e-50
sp|Q43827.1|MASY_RAPSA RecName: Full=Malate synthase, glyoxysoma...   186   6e-50
ref|XP_002873119.1| predicted protein [Arabidopsis lyrata subsp....   184   6e-50

>ref|NP_196006.1| malate synthase [Arabidopsis thaliana]
           gi|334187411|ref|NP_001190219.1| malate synthase
           [Arabidopsis thaliana]
           gi|13430428|gb|AAK25836.1|AF360126_1 putative malate
           synthase [Arabidopsis thaliana]
           gi|7406396|emb|CAB85506.1| malate synthase-like protein
           [Arabidopsis thaliana] gi|9758015|dbj|BAB08612.1| malate
           synthase-like protein [Arabidopsis thaliana]
           gi|15293187|gb|AAK93704.1| putative malate synthase
           [Arabidopsis thaliana] gi|332003280|gb|AED90663.1|
           malate synthase [Arabidopsis thaliana]
           gi|332003281|gb|AED90664.1| malate synthase [Arabidopsis
           thaliana]
          Length = 562

 Score =  186 bits (471), Expect(2) = 3e-50
 Identities = 89/92 (96%), Positives = 90/92 (97%)
 Frame = -2

Query: 276 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDY 97
           REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQM+EILYELRDHSVGLNCGRWDY
Sbjct: 234 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDY 293

Query: 96  IFSYVKTFQGHPDRLLPDRFLVGMGQHFMRSY 1
           IFSYVKTFQ HPDRLLPDR LVGMGQHFMRSY
Sbjct: 294 IFSYVKTFQAHPDRLLPDRVLVGMGQHFMRSY 325



 Score = 38.1 bits (87), Expect(2) = 3e-50
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -3

Query: 392 GFGPFFYLPKMEHSR 348
           GFGPFFYLPKMEHSR
Sbjct: 220 GFGPFFYLPKMEHSR 234


>emb|CAA73793.1| glyoxysomal malate synthase [Brassica napus]
          Length = 561

 Score =  186 bits (471), Expect(2) = 3e-50
 Identities = 89/92 (96%), Positives = 90/92 (97%)
 Frame = -2

Query: 276 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDY 97
           REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQM+EILYELRDHSVGLNCGRWDY
Sbjct: 234 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDY 293

Query: 96  IFSYVKTFQGHPDRLLPDRFLVGMGQHFMRSY 1
           IFSYVKTFQ HPDRLLPDR LVGMGQHFMRSY
Sbjct: 294 IFSYVKTFQAHPDRLLPDRVLVGMGQHFMRSY 325



 Score = 38.1 bits (87), Expect(2) = 3e-50
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -3

Query: 392 GFGPFFYLPKMEHSR 348
           GFGPFFYLPKMEHSR
Sbjct: 220 GFGPFFYLPKMEHSR 234


>sp|P13244.1|MASY_BRANA RecName: Full=Malate synthase, glyoxysomal gi|167150|gb|AAA32996.1|
           malate synthase (EC 4.1.3.2) [Brassica napus]
          Length = 561

 Score =  186 bits (471), Expect(2) = 3e-50
 Identities = 89/92 (96%), Positives = 90/92 (97%)
 Frame = -2

Query: 276 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDY 97
           REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQM+EILYELRDHSVGLNCGRWDY
Sbjct: 234 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDY 293

Query: 96  IFSYVKTFQGHPDRLLPDRFLVGMGQHFMRSY 1
           IFSYVKTFQ HPDRLLPDR LVGMGQHFMRSY
Sbjct: 294 IFSYVKTFQAHPDRLLPDRVLVGMGQHFMRSY 325



 Score = 38.1 bits (87), Expect(2) = 3e-50
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -3

Query: 392 GFGPFFYLPKMEHSR 348
           GFGPFFYLPKMEHSR
Sbjct: 220 GFGPFFYLPKMEHSR 234


>sp|Q43827.1|MASY_RAPSA RecName: Full=Malate synthase, glyoxysomal
           gi|474172|emb|CAA55407.1| malate synthase [Raphanus
           sativus]
          Length = 566

 Score =  186 bits (471), Expect(2) = 6e-50
 Identities = 89/92 (96%), Positives = 90/92 (97%)
 Frame = -2

Query: 276 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDY 97
           REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQM+EILYELRDHSVGLNCGRWDY
Sbjct: 236 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDY 295

Query: 96  IFSYVKTFQGHPDRLLPDRFLVGMGQHFMRSY 1
           IFSYVKTFQ HPDRLLPDR LVGMGQHFMRSY
Sbjct: 296 IFSYVKTFQAHPDRLLPDRVLVGMGQHFMRSY 327



 Score = 37.0 bits (84), Expect(2) = 6e-50
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = -3

Query: 392 GFGPFFYLPKMEHSR 348
           G+GPFFYLPKMEHSR
Sbjct: 222 GYGPFFYLPKMEHSR 236


>ref|XP_002873119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318956|gb|EFH49378.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 562

 Score =  184 bits (468), Expect(2) = 6e-50
 Identities = 88/92 (95%), Positives = 90/92 (97%)
 Frame = -2

Query: 276 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDY 97
           REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQM+EILYELRDH+VGLNCGRWDY
Sbjct: 234 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHTVGLNCGRWDY 293

Query: 96  IFSYVKTFQGHPDRLLPDRFLVGMGQHFMRSY 1
           IFSYVKTFQ HPDRLLPDR LVGMGQHFMRSY
Sbjct: 294 IFSYVKTFQAHPDRLLPDRVLVGMGQHFMRSY 325



 Score = 38.1 bits (87), Expect(2) = 6e-50
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -3

Query: 392 GFGPFFYLPKMEHSR 348
           GFGPFFYLPKMEHSR
Sbjct: 220 GFGPFFYLPKMEHSR 234


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