BLASTX nr result
ID: Coptis23_contig00040301
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00040301 (394 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_196006.1| malate synthase [Arabidopsis thaliana] gi|33418... 186 3e-50 emb|CAA73793.1| glyoxysomal malate synthase [Brassica napus] 186 3e-50 sp|P13244.1|MASY_BRANA RecName: Full=Malate synthase, glyoxysoma... 186 3e-50 sp|Q43827.1|MASY_RAPSA RecName: Full=Malate synthase, glyoxysoma... 186 6e-50 ref|XP_002873119.1| predicted protein [Arabidopsis lyrata subsp.... 184 6e-50 >ref|NP_196006.1| malate synthase [Arabidopsis thaliana] gi|334187411|ref|NP_001190219.1| malate synthase [Arabidopsis thaliana] gi|13430428|gb|AAK25836.1|AF360126_1 putative malate synthase [Arabidopsis thaliana] gi|7406396|emb|CAB85506.1| malate synthase-like protein [Arabidopsis thaliana] gi|9758015|dbj|BAB08612.1| malate synthase-like protein [Arabidopsis thaliana] gi|15293187|gb|AAK93704.1| putative malate synthase [Arabidopsis thaliana] gi|332003280|gb|AED90663.1| malate synthase [Arabidopsis thaliana] gi|332003281|gb|AED90664.1| malate synthase [Arabidopsis thaliana] Length = 562 Score = 186 bits (471), Expect(2) = 3e-50 Identities = 89/92 (96%), Positives = 90/92 (97%) Frame = -2 Query: 276 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDY 97 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQM+EILYELRDHSVGLNCGRWDY Sbjct: 234 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDY 293 Query: 96 IFSYVKTFQGHPDRLLPDRFLVGMGQHFMRSY 1 IFSYVKTFQ HPDRLLPDR LVGMGQHFMRSY Sbjct: 294 IFSYVKTFQAHPDRLLPDRVLVGMGQHFMRSY 325 Score = 38.1 bits (87), Expect(2) = 3e-50 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = -3 Query: 392 GFGPFFYLPKMEHSR 348 GFGPFFYLPKMEHSR Sbjct: 220 GFGPFFYLPKMEHSR 234 >emb|CAA73793.1| glyoxysomal malate synthase [Brassica napus] Length = 561 Score = 186 bits (471), Expect(2) = 3e-50 Identities = 89/92 (96%), Positives = 90/92 (97%) Frame = -2 Query: 276 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDY 97 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQM+EILYELRDHSVGLNCGRWDY Sbjct: 234 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDY 293 Query: 96 IFSYVKTFQGHPDRLLPDRFLVGMGQHFMRSY 1 IFSYVKTFQ HPDRLLPDR LVGMGQHFMRSY Sbjct: 294 IFSYVKTFQAHPDRLLPDRVLVGMGQHFMRSY 325 Score = 38.1 bits (87), Expect(2) = 3e-50 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = -3 Query: 392 GFGPFFYLPKMEHSR 348 GFGPFFYLPKMEHSR Sbjct: 220 GFGPFFYLPKMEHSR 234 >sp|P13244.1|MASY_BRANA RecName: Full=Malate synthase, glyoxysomal gi|167150|gb|AAA32996.1| malate synthase (EC 4.1.3.2) [Brassica napus] Length = 561 Score = 186 bits (471), Expect(2) = 3e-50 Identities = 89/92 (96%), Positives = 90/92 (97%) Frame = -2 Query: 276 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDY 97 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQM+EILYELRDHSVGLNCGRWDY Sbjct: 234 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDY 293 Query: 96 IFSYVKTFQGHPDRLLPDRFLVGMGQHFMRSY 1 IFSYVKTFQ HPDRLLPDR LVGMGQHFMRSY Sbjct: 294 IFSYVKTFQAHPDRLLPDRVLVGMGQHFMRSY 325 Score = 38.1 bits (87), Expect(2) = 3e-50 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = -3 Query: 392 GFGPFFYLPKMEHSR 348 GFGPFFYLPKMEHSR Sbjct: 220 GFGPFFYLPKMEHSR 234 >sp|Q43827.1|MASY_RAPSA RecName: Full=Malate synthase, glyoxysomal gi|474172|emb|CAA55407.1| malate synthase [Raphanus sativus] Length = 566 Score = 186 bits (471), Expect(2) = 6e-50 Identities = 89/92 (96%), Positives = 90/92 (97%) Frame = -2 Query: 276 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDY 97 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQM+EILYELRDHSVGLNCGRWDY Sbjct: 236 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDY 295 Query: 96 IFSYVKTFQGHPDRLLPDRFLVGMGQHFMRSY 1 IFSYVKTFQ HPDRLLPDR LVGMGQHFMRSY Sbjct: 296 IFSYVKTFQAHPDRLLPDRVLVGMGQHFMRSY 327 Score = 37.0 bits (84), Expect(2) = 6e-50 Identities = 14/15 (93%), Positives = 15/15 (100%) Frame = -3 Query: 392 GFGPFFYLPKMEHSR 348 G+GPFFYLPKMEHSR Sbjct: 222 GYGPFFYLPKMEHSR 236 >ref|XP_002873119.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297318956|gb|EFH49378.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 562 Score = 184 bits (468), Expect(2) = 6e-50 Identities = 88/92 (95%), Positives = 90/92 (97%) Frame = -2 Query: 276 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDY 97 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQM+EILYELRDH+VGLNCGRWDY Sbjct: 234 REAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHTVGLNCGRWDY 293 Query: 96 IFSYVKTFQGHPDRLLPDRFLVGMGQHFMRSY 1 IFSYVKTFQ HPDRLLPDR LVGMGQHFMRSY Sbjct: 294 IFSYVKTFQAHPDRLLPDRVLVGMGQHFMRSY 325 Score = 38.1 bits (87), Expect(2) = 6e-50 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = -3 Query: 392 GFGPFFYLPKMEHSR 348 GFGPFFYLPKMEHSR Sbjct: 220 GFGPFFYLPKMEHSR 234