BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040294
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]   120   2e-25
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   117   1e-24
emb|CBI36964.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21

>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
          Length = 494

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/103 (53%), Positives = 81/103 (78%)
 Frame = +1

Query: 1   EKAMELYEKMGQLDFTSTHLVYNNLMSLLIRVGAAERVPPLIKEMKNKDITPNIHTYNYL 180
           +KA+EL++K+ +L+F S+ L YNN++SL +RVG  E+VP L+ EM+ KDI  +++TYN L
Sbjct: 146 DKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLL 205

Query: 181 MNSYAAMKDIDSAERVLEEMEEAGVKCDWTTYANLATIYSKAG 309
           MNSYA++KD ++ E+VLE+M++ GV+ DW TY NLA IY  AG
Sbjct: 206 MNSYASVKDFEAVEQVLEKMKKRGVERDWFTYGNLANIYVDAG 248


>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial [Vitis vinifera]
           gi|296089781|emb|CBI39600.3| unnamed protein product
           [Vitis vinifera]
          Length = 498

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/103 (52%), Positives = 81/103 (78%)
 Frame = +1

Query: 1   EKAMELYEKMGQLDFTSTHLVYNNLMSLLIRVGAAERVPPLIKEMKNKDITPNIHTYNYL 180
           +KA+EL++K+ +L+F S+ L YNN++SL +RVG  E+VP L+ EM+ KDI  +++TYN L
Sbjct: 150 DKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLL 209

Query: 181 MNSYAAMKDIDSAERVLEEMEEAGVKCDWTTYANLATIYSKAG 309
           MNSYA++KD ++ E+VL++M++ GV+ DW TY NLA IY  AG
Sbjct: 210 MNSYASVKDFEAVEQVLDKMKKRGVERDWFTYGNLANIYVDAG 252


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   EKAMELYEKMGQLDFTSTHLVYNNLMSLLIRVGAAERVPPLIKEMKNKDITPNIHTYNYL 180
           EKA+ L+EKM +L+F ST L +NNLMSL +R+G  E VPPL+ EMK + I+P+  TYN L
Sbjct: 161 EKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNIL 220

Query: 181 MNSYAAMKDIDSAERVLEEME-EAGVKCDWTTYANLATIYSKAGL 312
           M SYA + DI+ AERVLEE++ E   K  WTTY+NLA +Y  A L
Sbjct: 221 MQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARL 265


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   EKAMELYEKMGQLDFTSTHLVYNNLMSLLIRVGAAERVPPLIKEMKNKDITPNIHTYNYL 180
           EKA+ L+EKM +L+F ST L +NNLMSL +R+G  E VPPL+ EMK + I+P+  TYN L
Sbjct: 200 EKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNIL 259

Query: 181 MNSYAAMKDIDSAERVLEEME-EAGVKCDWTTYANLATIYSKAGL 312
           M SYA + DI+ AERVLEE++ E   K  WTTY+NLA +Y  A L
Sbjct: 260 MQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARL 304


>ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g60770-like [Brachypodium distachyon]
          Length = 536

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/105 (51%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   EKAMELYEKMGQLDFTSTHLVYNNLMSLLIRVGAAERVPPLIKEMKNKDITPNIHTYNYL 180
           EKA  L EKM +L+F  T + YN+LM+L  +V   E+VP +I++MK  D+ P+++TYN  
Sbjct: 136 EKAEALMEKMKELNFAFTAMSYNSLMTLYTKVNQPEKVPSIIQDMKADDVLPDVYTYNVW 195

Query: 181 MNSYAAMKDIDSAERVLEEMEEAG-VKCDWTTYANLATIYSKAGL 312
           M S AA +DI   ERV+EEM+  G V  DWTTY+NLA+IY +AGL
Sbjct: 196 MRSLAARQDISGVERVIEEMKRDGRVVPDWTTYSNLASIYVEAGL 240