BLASTX nr result

ID: Coptis23_contig00040272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040272
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    69   5e-10
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    66   3e-09
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    65   4e-09
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
 Frame = -1

Query: 363 LNSDGTLKNSEGGWGAVIRNDQGEVINAAHGSSEYKNIALIELQGVQQGIRLAKEKGLRR 184
           LN+DG++     G+G + R+  G+ I A    +   +I L+EL  + +G+ LA   G++ 
Sbjct: 165 LNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKA 224

Query: 183 LKVQTDSQNVVSFFN-KSEYPWEATHMIRNIRKMIAELEQFSIIHVFRECNRLADSLA 13
           + V++DS +VV   N K  Y   A   + +I  ++ + E++ + H +RE N+ AD L+
Sbjct: 225 IWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRETNKAADFLS 282


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
 Frame = -1

Query: 363 LNSDGTLKNSEGGWGAVIRNDQGEVINAAHGSSEYKNIALIELQGVQQGIRLAKEKGLRR 184
           LN+DG++     G+G + R+  G+ I A    +   +I L+EL  + +G+ LA   G++ 
Sbjct: 278 LNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKA 337

Query: 183 LKVQTDSQNVVSFFN-KSEYPWEATHMIRNIRKMIAELEQFSIIHVFRECNRLADSLA 13
           + V++DS + V   N K  Y   A   + +I  ++ + E++ + H +RE N+ AD L+
Sbjct: 338 IWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRETNKAADFLS 395


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/118 (27%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
 Frame = -1

Query: 363 LNSDGTLKNSEGGWGAVIRNDQGEVINAAHGSSEYKNIALIELQGVQQGIRLAKEKGLRR 184
           LN+DG++     G+G ++R+++G  I A    +   +I L+EL  + +G+ LA   G++ 
Sbjct: 284 LNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGLVLALGLGIKV 343

Query: 183 LKVQTDSQNVVSFFNK-SEYPWEATHMIRNIRKMIAELEQFSIIHVFRECNRLADSLA 13
           + V++DS + V   N+   +  +A   + +I  ++ + E++ + H +RE N+ AD L+
Sbjct: 344 IWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWRETNKAADYLS 401


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/117 (29%), Positives = 69/117 (58%)
 Frame = -1

Query: 363 LNSDGTLKNSEGGWGAVIRNDQGEVINAAHGSSEYKNIALIELQGVQQGIRLAKEKGLRR 184
           LN+DG++ ++   +G ++R+ +GE I A    +   ++ L EL  + +G+ L+   G++ 
Sbjct: 318 LNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWRGLVLSLGLGIKA 377

Query: 183 LKVQTDSQNVVSFFNKSEYPWEATHMIRNIRKMIAELEQFSIIHVFRECNRLADSLA 13
           + V++DS +VV   N+ +   +A   +  I K++ + +++ I H +RE NR AD LA
Sbjct: 378 IWVESDSMSVVRTVNRKQLCPKAVGYLNQIWKLLKKFDKYQISHSWRETNRAADHLA 434


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
 Frame = -1

Query: 363 LNSDGTLKNSEGGWGAVIRNDQGEVINAAHGSSEYKNIALIELQGVQQGIRLAKEKGLRR 184
           LN+DG++ +   G G + R+ +G  I      +   +I L+EL  + +G+ LA    ++ 
Sbjct: 177 LNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWRGLVLALNLHIQV 236

Query: 183 LKVQTDSQNVVSFFNKSE-YPWEATHMIRNIRKMIAELEQFSIIHVFRECNRLADSLA 13
           L V++DS +VV+  N+ + Y  +A   ++ IR ++ + ++  + H +RE NR AD LA
Sbjct: 237 LWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWRETNRAADYLA 294


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