BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040267
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
emb|CBI32989.3| unnamed protein product [Vitis vinifera]              113   1e-23
emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]   112   4e-23
ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containi...   104   6e-21
ref|NP_564786.1| pentatricopeptide repeat-containing protein [Ar...   103   1e-20

>ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Vitis vinifera]
          Length = 396

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/78 (69%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
 Frame = -1

Query: 313 YTLVYYLCQGGDFENALRACKASMLNQWFPNFATMKMLVNGLVSISKVEEARELVGKMKE 134
           +TLVY+LCQGGDFE+ALR CK  M   WFPN +TM  LVNGLVSISKVEEAREL+G++KE
Sbjct: 319 FTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARELIGQIKE 378

Query: 133 RFTK-VDMWKETEEGLPQ 83
           +F++ VD W E E GLPQ
Sbjct: 379 KFSRNVDKWNEIEAGLPQ 396


>emb|CBI32989.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/78 (69%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
 Frame = -1

Query: 313 YTLVYYLCQGGDFENALRACKASMLNQWFPNFATMKMLVNGLVSISKVEEARELVGKMKE 134
           +TLVY+LCQGGDFE+ALR CK  M   WFPN +TM  LVNGLVSISKVEEAREL+G++KE
Sbjct: 335 FTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARELIGQIKE 394

Query: 133 RFTK-VDMWKETEEGLPQ 83
           +F++ VD W E E GLPQ
Sbjct: 395 KFSRNVDKWNEIEAGLPQ 412


>emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
          Length = 396

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/78 (67%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
 Frame = -1

Query: 313 YTLVYYLCQGGDFENALRACKASMLNQWFPNFATMKMLVNGLVSISKVEEARELVGKMKE 134
           +TLVY+LCQGGDFE+ALR CK  M   WFPN +TM  LVNGLVSISKVEEA+EL+G++KE
Sbjct: 319 FTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEAQELIGQIKE 378

Query: 133 RFTK-VDMWKETEEGLPQ 83
           +F++ VD W E E GLPQ
Sbjct: 379 KFSRNVDKWNEIEAGLPQ 396


>ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449471723|ref|XP_004153390.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449530564|ref|XP_004172264.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
          Length = 405

 Score =  104 bits (260), Expect = 6e-21
 Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = -1

Query: 313 YTLVYYLCQGGDFENALRACKASMLNQWFPNFATMKMLVNGLVSISKVEEARELVGKMKE 134
           +TL Y+LC+GGD+E A + C  SM   W PNF+TMK LV+GLVSISKVEEA++L+G++KE
Sbjct: 328 FTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQLIGQIKE 387

Query: 133 RFTK-VDMWKETEEGLPQ 83
           RF+K V+ W E E GLPQ
Sbjct: 388 RFSKNVEKWSEIEAGLPQ 405


>ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g61870, mitochondrial; AltName: Full=Protein
           PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
           gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8
           [Arabidopsis thaliana] gi|3367521|gb|AAC28506.1| Similar
           to gb|U08285 membrane-associated salt-inducible protein
           from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
           come from this gene [Arabidopsis thaliana]
           gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis
           thaliana] gi|32815835|gb|AAP88326.1| At1g61870
           [Arabidopsis thaliana] gi|332195777|gb|AEE33898.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 408

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/78 (60%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = -1

Query: 313 YTLVYYLCQGGDFENALRACKASMLNQWFPNFATMKMLVNGLVSISKVEEARELVGKMKE 134
           +TL+YYLC+GGDFE AL  CK SM   W P+F+ MK LVNGL   SKVEEA+EL+G++KE
Sbjct: 331 FTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKE 390

Query: 133 RFTK-VDMWKETEEGLPQ 83
           +FT+ V++W E E  LPQ
Sbjct: 391 KFTRNVELWNEVEAALPQ 408