BLASTX nr result

ID: Coptis23_contig00040260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040260
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632735.1| PREDICTED: uncharacterized protein At5g39865...    70   2e-10
ref|XP_004136649.1| PREDICTED: uncharacterized protein At5g39865...    67   2e-09
ref|XP_004167781.1| PREDICTED: uncharacterized protein At5g39865...    59   4e-07
ref|XP_004142711.1| PREDICTED: uncharacterized protein At5g39865...    59   4e-07
ref|XP_003520499.1| PREDICTED: uncharacterized protein At5g39865...    59   4e-07

>ref|XP_003632735.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 393

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/74 (54%), Positives = 43/74 (58%), Gaps = 27/74 (36%)
 Frame = +2

Query: 116 MGCSASRPDTLL-------------------------SSVP--RTISLPNHFVHHPPVKK 214
           MGCSASRP+TLL                         SS P  RT+SLP   VHHPP+KK
Sbjct: 1   MGCSASRPNTLLPRPSEEASFSSSSQGSSSSSSSSLQSSAPISRTLSLPTPLVHHPPLKK 60

Query: 215 GDTHHLVSLTSTTY 256
           GDTHHLVSLTSTTY
Sbjct: 61  GDTHHLVSLTSTTY 74


>ref|XP_004136649.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
           gi|449524639|ref|XP_004169329.1| PREDICTED:
           uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 368

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/58 (56%), Positives = 37/58 (63%), Gaps = 11/58 (18%)
 Frame = +2

Query: 116 MGCSASRPDTLLSS-----------VPRTISLPNHFVHHPPVKKGDTHHLVSLTSTTY 256
           MGCSASRP T  S+           VPR  SLP   +HHPP+  GDTHHLV+LTSTTY
Sbjct: 1   MGCSASRPITFHSTNPESSSSSSPPVPRAFSLPTPLIHHPPISDGDTHHLVTLTSTTY 58


>ref|XP_004167781.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 373

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/68 (47%), Positives = 36/68 (52%), Gaps = 21/68 (30%)
 Frame = +2

Query: 116 MGCSASRPDTLLSS---------------------VPRTISLPNHFVHHPPVKKGDTHHL 232
           MGCSAS+P    ++                     + R  SLP   VHHPPV KGDTHHL
Sbjct: 1   MGCSASKPVAATAATRSTPNSEPFYSPSSAGSSPALGRAFSLPTPLVHHPPVNKGDTHHL 60

Query: 233 VSLTSTTY 256
           VSLTSTTY
Sbjct: 61  VSLTSTTY 68


>ref|XP_004142711.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 373

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/68 (47%), Positives = 36/68 (52%), Gaps = 21/68 (30%)
 Frame = +2

Query: 116 MGCSASRPDTLLSS---------------------VPRTISLPNHFVHHPPVKKGDTHHL 232
           MGCSAS+P    ++                     + R  SLP   VHHPPV KGDTHHL
Sbjct: 1   MGCSASKPVAATAATRSTPNSEPFYSPSSAGSSPALGRAFSLPTPLVHHPPVNKGDTHHL 60

Query: 233 VSLTSTTY 256
           VSLTSTTY
Sbjct: 61  VSLTSTTY 68


>ref|XP_003520499.1| PREDICTED: uncharacterized protein At5g39865-like [Glycine max]
          Length = 411

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 164 RTISLPNHFVHHPPVKKGDTHHLVSLTSTTY 256
           RT+SLP   VHHPP+KKGD+HHLVSLTSTTY
Sbjct: 58  RTLSLPMPLVHHPPIKKGDSHHLVSLTSTTY 88


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