BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040252
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26044.3| unnamed protein product [Vitis vinifera]              223   1e-56
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   223   1e-56
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   201   5e-50
ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. l...   201   7e-50

>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  223 bits (568), Expect = 1e-56
 Identities = 109/174 (62%), Positives = 133/174 (76%), Gaps = 11/174 (6%)
 Frame = -3

Query: 490  LITDNESSIQEECQSLFLELVLDRLSIMGAAGSAHSIPPCSSADGQMRSLNRDMESVFPG 311
            LITDNESSIQEEC++LFLELVLDR+S  G+  SAH    C+  + + +SL  ++E +FPG
Sbjct: 488  LITDNESSIQEECENLFLELVLDRVSRAGSTVSAHKKLVCNDLNAKTKSLEMEIELLFPG 547

Query: 310  GVLFILKGLCDSEVMPCIKKICMSLGKKKRLKPAIAVALQNIIKTSESLWLTYSMPIEKW 131
            GVL +LK +C+ EV P +KKIC SLGKKKRLKP IAVALQ +IK SESLWL++SMPIEKW
Sbjct: 548  GVLVLLKEICNGEVAPWVKKICTSLGKKKRLKPKIAVALQGMIKASESLWLSHSMPIEKW 607

Query: 130  TAPAGTWLLLSEVSSFLPKAVDWDFLHHHWQLLDKS-----------DLDNGIE 2
            TAP G W LLSEVS FL KAVDW+FLHHHWQL+DK+           D D+G++
Sbjct: 608  TAPPGAWFLLSEVSEFLSKAVDWEFLHHHWQLVDKNGPGVEFRSPVQDFDDGVD 661


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  223 bits (568), Expect = 1e-56
 Identities = 109/174 (62%), Positives = 133/174 (76%), Gaps = 11/174 (6%)
 Frame = -3

Query: 490  LITDNESSIQEECQSLFLELVLDRLSIMGAAGSAHSIPPCSSADGQMRSLNRDMESVFPG 311
            LITDNESSIQEEC++LFLELVLDR+S  G+  SAH    C+  + + +SL  ++E +FPG
Sbjct: 529  LITDNESSIQEECENLFLELVLDRVSRAGSTVSAHKKLVCNDLNAKTKSLEMEIELLFPG 588

Query: 310  GVLFILKGLCDSEVMPCIKKICMSLGKKKRLKPAIAVALQNIIKTSESLWLTYSMPIEKW 131
            GVL +LK +C+ EV P +KKIC SLGKKKRLKP IAVALQ +IK SESLWL++SMPIEKW
Sbjct: 589  GVLVLLKEICNGEVAPWVKKICTSLGKKKRLKPKIAVALQGMIKASESLWLSHSMPIEKW 648

Query: 130  TAPAGTWLLLSEVSSFLPKAVDWDFLHHHWQLLDKS-----------DLDNGIE 2
            TAP G W LLSEVS FL KAVDW+FLHHHWQL+DK+           D D+G++
Sbjct: 649  TAPPGAWFLLSEVSEFLSKAVDWEFLHHHWQLVDKNGPGVEFRSPVQDFDDGVD 702


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
           predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  202 bits (514), Expect = 2e-50
 Identities = 97/155 (62%), Positives = 123/155 (79%)
 Frame = -3

Query: 490 LITDNESSIQEECQSLFLELVLDRLSIMGAAGSAHSIPPCSSADGQMRSLNRDMESVFPG 311
           LITDNESSIQEEC++LF+ELVLDR+S  G  G+  +    S ++ + + + R++  +FPG
Sbjct: 447 LITDNESSIQEECENLFMELVLDRISRAGPEGTIRNQTTFSDSNVKAKDIEREIGLLFPG 506

Query: 310 GVLFILKGLCDSEVMPCIKKICMSLGKKKRLKPAIAVALQNIIKTSESLWLTYSMPIEKW 131
            +L +LK +C+ EV P +KKIC SLGKKKRL+P IA+ALQ IIKTSES W++ SMPIEKW
Sbjct: 507 -ILVLLKEICNGEVTPWVKKICTSLGKKKRLRPKIAIALQYIIKTSESYWVSNSMPIEKW 565

Query: 130 TAPAGTWLLLSEVSSFLPKAVDWDFLHHHWQLLDK 26
           TAP G W LLSEVS++L KAVDW+FLHHHWQLLDK
Sbjct: 566 TAPPGAWFLLSEVSAYLSKAVDWEFLHHHWQLLDK 600


>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  201 bits (511), Expect = 5e-50
 Identities = 94/159 (59%), Positives = 123/159 (77%)
 Frame = -3

Query: 490 LITDNESSIQEECQSLFLELVLDRLSIMGAAGSAHSIPPCSSADGQMRSLNRDMESVFPG 311
           LITDNESSIQEEC+++F ELVLDR+S    A S++S  P S+   + + ++ +ME +FP 
Sbjct: 502 LITDNESSIQEECENMFKELVLDRISRAATATSSYS-EPLSNRKMKGKGVDNEMEKLFPN 560

Query: 310 GVLFILKGLCDSEVMPCIKKICMSLGKKKRLKPAIAVALQNIIKTSESLWLTYSMPIEKW 131
           G L++L+ +C  EV P +KKIC +LGKKKR+   I  ALQNII+ SES+WL++SMPIEKW
Sbjct: 561 GTLYLLREICHGEVSPWVKKICTNLGKKKRINHKIVTALQNIIRASESIWLSHSMPIEKW 620

Query: 130 TAPAGTWLLLSEVSSFLPKAVDWDFLHHHWQLLDKSDLD 14
           TAP G W LLSEVS+FL K VDW+FLHHHWQLLDK +++
Sbjct: 621 TAPPGAWFLLSEVSTFLSKVVDWEFLHHHWQLLDKHEVE 659


>ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316038|gb|EFH46461.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1315

 Score =  201 bits (510), Expect = 7e-50
 Identities = 97/158 (61%), Positives = 126/158 (79%)
 Frame = -3

Query: 490 LITDNESSIQEECQSLFLELVLDRLSIMGAAGSAHSIPPCSSADGQMRSLNRDMESVFPG 311
           +I DNE+SIQEEC+++F ELVL+R+   G   S  S+P  ++ +   + L+RD+E++FP 
Sbjct: 508 MIMDNETSIQEECENVFHELVLERILRAGNVLSPDSLP--NNRNNTSKDLDRDIEALFPE 565

Query: 310 GVLFILKGLCDSEVMPCIKKICMSLGKKKRLKPAIAVALQNIIKTSESLWLTYSMPIEKW 131
           GVL +L+ LC+SEV P + KIC SLGKKKRLKP +A+ALQ IIK SESLWL+ SMPI KW
Sbjct: 566 GVLVLLRELCNSEVSPWVTKICGSLGKKKRLKPRVALALQCIIKESESLWLSRSMPINKW 625

Query: 130 TAPAGTWLLLSEVSSFLPKAVDWDFLHHHWQLLDKSDL 17
           TAPAG W LLSEVS +LPK+V+W+FLHHHWQLLDK+D+
Sbjct: 626 TAPAGAWFLLSEVSVYLPKSVEWEFLHHHWQLLDKNDV 663