BLASTX nr result

ID: Coptis23_contig00040239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040239
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...   103   1e-20
ref|XP_002274192.2| PREDICTED: protein SPA1-RELATED 3 [Vitis vin...    99   3e-19
ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Viti...    98   6e-19
ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...    98   6e-19
ref|XP_002885080.1| hypothetical protein ARALYDRAFT_897813 [Arab...    96   3e-18

>ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score =  103 bits (258), Expect = 1e-20
 Identities = 60/134 (44%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
 Frame = -2

Query: 379 SASSRGLNACVISGGSTELHQESRRDASSDLLNEAKFVQNRKEI----DSQIGSLGTSWK 212
           S SSR LN+  +S  +  +H   R   S +   ++ F + R  +      Q  +LG  + 
Sbjct: 12  SGSSRALNSSGVSDRNQRVHCPQRNPFSGEASQDSGFRKERDRVLLAQGGQPKNLGGGFS 71

Query: 211 -----EVRIHTDDCLMGKSDISLRQWLDTPERVVDHLECLHIFKQIVEMVDLGHSQTIVV 47
                EV +    C +   DISLRQWLD PER VD  ECLHIF+QIVE+V + HSQ +VV
Sbjct: 72  GLCEDEVEVDPFFCAVEWGDISLRQWLDKPERSVDAFECLHIFRQIVEIVSVAHSQGVVV 131

Query: 46  QNVRPSCFVMSSVN 5
            NVRPSCFVMSS N
Sbjct: 132 HNVRPSCFVMSSFN 145


>ref|XP_002274192.2| PREDICTED: protein SPA1-RELATED 3 [Vitis vinifera]
          Length = 906

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 61/137 (44%), Positives = 79/137 (57%), Gaps = 11/137 (8%)
 Frame = -2

Query: 379 SASSRGLNACVISGGSTELHQESRRDASSDLLNEAKFVQNRKEI-----------DSQIG 233
           S SSRGLNA V+S  S+ L   +R   S D  +  + +  + E            D+ +G
Sbjct: 12  SNSSRGLNAGVVSSQSSRLLIGNRTVFSGDTSDNLRCLFRKSESQQVRPSCADLNDNPLG 71

Query: 232 SLGTSWKEVRIHTDDCLMGKSDISLRQWLDTPERVVDHLECLHIFKQIVEMVDLGHSQTI 53
             G    E+        + +  +SLR+WLD P R VD LECLHIF+QIVE+V+L HSQ +
Sbjct: 72  FSGACEDEMEEGHTVRGVERGHVSLRRWLDKPNRSVDLLECLHIFRQIVEIVNLAHSQGV 131

Query: 52  VVQNVRPSCFVMSSVNR 2
           VV NVRPSCFVMSS NR
Sbjct: 132 VVHNVRPSCFVMSSSNR 148


>ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera]
          Length = 903

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 58/134 (43%), Positives = 75/134 (55%), Gaps = 12/134 (8%)
 Frame = -2

Query: 370 SRGLNACVISGGSTELHQESRR-DASSDLLNEAKFVQNRKEIDSQIGSLGTSWKEV---- 206
           SRGLN  ++S G     + + R   S    +++ F+  RKE D  + S   + K      
Sbjct: 15  SRGLNVSIVSHGRNPRQRHANRIGLSGGASHDSGFISGRKERDHVLSSHTKNHKNQVGIS 74

Query: 205 RIHTDDCLMGK-------SDISLRQWLDTPERVVDHLECLHIFKQIVEMVDLGHSQTIVV 47
           ++  DD  +          D+SLR WLD PER VD LECLHIF QI E+V+  HSQ +VV
Sbjct: 75  QVCDDDVALDPFVRAIEWGDVSLRHWLDKPERRVDALECLHIFTQIAEIVNAAHSQGVVV 134

Query: 46  QNVRPSCFVMSSVN 5
            NVRPSCFVMSS N
Sbjct: 135 NNVRPSCFVMSSFN 148


>ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 60/137 (43%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
 Frame = -2

Query: 379 SASSRGLNACVISGGSTELHQESRRDASSDLLNEAKFVQNRKEIDSQI------------ 236
           S SSR LN+  +S  +  +H   R     +   ++ F   RKE D  +            
Sbjct: 13  SGSSRALNSSGVSDRNQRVHCPQRNPFLGEASQDSGF---RKERDRFLLAQGGQPKNLGG 69

Query: 235 GSLGTSWKEVRIHTDDCLMGKSDISLRQWLDTPERVVDHLECLHIFKQIVEMVDLGHSQT 56
           G  G    EV +    C +   DISLRQWLD PER V   ECLHIF+QIVE+V + HSQ 
Sbjct: 70  GFSGLCEDEVEVDPFFCAVEWGDISLRQWLDKPERSVGAFECLHIFRQIVEIVSVAHSQG 129

Query: 55  IVVQNVRPSCFVMSSVN 5
           +VV NVRPSCFVMSS N
Sbjct: 130 VVVHNVRPSCFVMSSFN 146


>ref|XP_002885080.1| hypothetical protein ARALYDRAFT_897813 [Arabidopsis lyrata subsp.
           lyrata] gi|297330920|gb|EFH61339.1| hypothetical protein
           ARALYDRAFT_897813 [Arabidopsis lyrata subsp. lyrata]
          Length = 837

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 59/133 (44%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
 Frame = -2

Query: 379 SASSRGLNACVISGGSTELHQESRRDASSDLLNEAKFVQNRKEIDSQIGSLGTSWKEVRI 200
           +++SRG N   +S  +TE     R  A S         +    +D  + SL  S    + 
Sbjct: 6   NSNSRGFNTSGLSDRNTEFLPVERITARS---------KPSSHVDEYVRSLFGSTSTHKS 56

Query: 199 HTDDCL--------MGKSDISLRQWLDTPERVVDHLECLHIFKQIVEMVDLGHSQTIVVQ 44
             DD L        +   D+SLRQWLD PER VD LECLH+F+QIVE+V+  HSQ IVV 
Sbjct: 57  GEDDSLGIDPFVSSLEWGDVSLRQWLDKPERSVDVLECLHVFRQIVEIVNAAHSQGIVVH 116

Query: 43  NVRPSCFVMSSVN 5
           NVRPSCFVMSS N
Sbjct: 117 NVRPSCFVMSSFN 129


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