BLASTX nr result

ID: Coptis23_contig00040223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040223
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelic...   129   2e-28
gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriand...   127   7e-28
ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltran...   120   1e-25
emb|CBI21093.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelica gigas]
          Length = 317

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/108 (55%), Positives = 78/108 (72%)
 Frame = -3

Query: 324 PLQSLSDLSPNFFVGLLKALVPMEFTNIYMMGLNQLYDIGSDKINKPTLPLASGELSVVA 145
           PL S  DLSP FFVGLLK ++P+   NIY++GLNQLYD+  DK+NKP LP+ASGE S+  
Sbjct: 47  PLVSFEDLSPAFFVGLLKVMIPIVCVNIYVVGLNQLYDVEIDKVNKPNLPIASGEYSMET 106

Query: 144 GTTIVAISGILGIALAVMFKSPSVLYGVLAWMFFTSVYSTDLPLLRWK 1
           G  IV+  G++ I + +MF+SP VLY +L   FF + YS D+PL RWK
Sbjct: 107 GKAIVSAFGLMSIIMGIMFQSPPVLYCLLVCFFFGTAYSIDVPLFRWK 154


>gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriandrum sativum]
          Length = 401

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/108 (55%), Positives = 78/108 (72%)
 Frame = -3

Query: 324 PLQSLSDLSPNFFVGLLKALVPMEFTNIYMMGLNQLYDIGSDKINKPTLPLASGELSVVA 145
           PL S+ DLSP FFVG LKAL+P  F NIY++GLNQL+D+  DK+NKP LPLASGE S+  
Sbjct: 131 PLTSIGDLSPAFFVGYLKALIPSIFMNIYVVGLNQLFDVEIDKVNKPNLPLASGEYSMGL 190

Query: 144 GTTIVAISGILGIALAVMFKSPSVLYGVLAWMFFTSVYSTDLPLLRWK 1
           G  IV+  G++  A+ ++F+SP V + +L    F S YS +LPLLRWK
Sbjct: 191 GKAIVSAFGLMSFAMGIVFQSPPVFFALLICFLFGSAYSVELPLLRWK 238


>ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltransferase 1,
           chloroplastic-like [Vitis vinifera]
          Length = 397

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/108 (50%), Positives = 79/108 (73%)
 Frame = -3

Query: 324 PLQSLSDLSPNFFVGLLKALVPMEFTNIYMMGLNQLYDIGSDKINKPTLPLASGELSVVA 145
           PL+++SDLSP FFVGLLKA+VP    NIY++GLNQ++D+  DK+NKP LPLASG+ S+  
Sbjct: 127 PLETISDLSPAFFVGLLKAMVPSVLMNIYVVGLNQIFDVEIDKVNKPELPLASGDFSMET 186

Query: 144 GTTIVAISGILGIALAVMFKSPSVLYGVLAWMFFTSVYSTDLPLLRWK 1
           G+ IV IS ++ + + +MF+SP +   +L      + YS ++PLLRWK
Sbjct: 187 GSQIVFISLLMSVGMGIMFQSPPLFCALLISFLLGTAYSIEIPLLRWK 234


>emb|CBI21093.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/108 (50%), Positives = 79/108 (73%)
 Frame = -3

Query: 324 PLQSLSDLSPNFFVGLLKALVPMEFTNIYMMGLNQLYDIGSDKINKPTLPLASGELSVVA 145
           PL+++SDLSP FFVGLLKA+VP    NIY++GLNQ++D+  DK+NKP LPLASG+ S+  
Sbjct: 103 PLETISDLSPAFFVGLLKAMVPSVLMNIYVVGLNQIFDVEIDKVNKPELPLASGDFSMET 162

Query: 144 GTTIVAISGILGIALAVMFKSPSVLYGVLAWMFFTSVYSTDLPLLRWK 1
           G+ IV IS ++ + + +MF+SP +   +L      + YS ++PLLRWK
Sbjct: 163 GSQIVFISLLMSVGMGIMFQSPPLFCALLISFLLGTAYSIEIPLLRWK 210


>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/108 (51%), Positives = 77/108 (71%)
 Frame = -3

Query: 324 PLQSLSDLSPNFFVGLLKALVPMEFTNIYMMGLNQLYDIGSDKINKPTLPLASGELSVVA 145
           P++++S+LSP FF+GLLKALVP    NIY++GLNQL+D+  DK+NKP LPLASG+ S+  
Sbjct: 27  PVETISELSPTFFMGLLKALVPSVLMNIYVVGLNQLFDVEIDKVNKPYLPLASGDFSMGT 86

Query: 144 GTTIVAISGILGIALAVMFKSPSVLYGVLAWMFFTSVYSTDLPLLRWK 1
           G  IV+ S +   A+ +MF+SP +   +L      SVYS +LP LRWK
Sbjct: 87  GVAIVSASLLASFAMGIMFQSPLLFSALLISCVLGSVYSIELPFLRWK 134


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