BLASTX nr result

ID: Coptis23_contig00040197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040197
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25304.3| unnamed protein product [Vitis vinifera]              101   7e-20
ref|XP_002275988.1| PREDICTED: probable membrane-associated kina...   101   7e-20
ref|XP_002309436.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002274312.1| PREDICTED: probable membrane-associated kina...    86   2e-15
emb|CAN80967.1| hypothetical protein VITISV_005611 [Vitis vinifera]    86   2e-15

>emb|CBI25304.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/67 (73%), Positives = 55/67 (82%)
 Frame = -3

Query: 334 HEVHVLKRSSSANSEIETSVQGAIAYCKQSQQVLSSRKNSSEVGFCSLSAARIAACEDQG 155
           HE   LKRSSSANSE E S+QGAIA+CKQSQQ+  SRK  SEVGFC+LSA+RIA C+DQ 
Sbjct: 203 HEFQFLKRSSSANSEFECSIQGAIAHCKQSQQLFRSRKTVSEVGFCTLSASRIAVCDDQE 262

Query: 154 RPGLCRG 134
           RP LCRG
Sbjct: 263 RPVLCRG 269


>ref|XP_002275988.1| PREDICTED: probable membrane-associated kinase regulator 4-like
           [Vitis vinifera]
          Length = 361

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/67 (73%), Positives = 55/67 (82%)
 Frame = -3

Query: 334 HEVHVLKRSSSANSEIETSVQGAIAYCKQSQQVLSSRKNSSEVGFCSLSAARIAACEDQG 155
           HE   LKRSSSANSE E S+QGAIA+CKQSQQ+  SRK  SEVGFC+LSA+RIA C+DQ 
Sbjct: 295 HEFQFLKRSSSANSEFECSIQGAIAHCKQSQQLFRSRKTVSEVGFCTLSASRIAVCDDQE 354

Query: 154 RPGLCRG 134
           RP LCRG
Sbjct: 355 RPVLCRG 361


>ref|XP_002309436.1| predicted protein [Populus trichocarpa] gi|222855412|gb|EEE92959.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/64 (67%), Positives = 53/64 (82%)
 Frame = -3

Query: 331 EVHVLKRSSSANSEIETSVQGAIAYCKQSQQVLSSRKNSSEVGFCSLSAARIAACEDQGR 152
           ++ +LKRSSS+NSE E+S++GAIA+CK+SQQ+ SSRK SSEVG CSLSA  IAA  DQ R
Sbjct: 299 DLQLLKRSSSSNSEFESSIEGAIAHCKRSQQLFSSRKTSSEVGVCSLSAPVIAASGDQER 358

Query: 151 PGLC 140
           P LC
Sbjct: 359 PKLC 362


>ref|XP_002274312.1| PREDICTED: probable membrane-associated kinase regulator 4-like
           [Vitis vinifera]
          Length = 363

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/65 (63%), Positives = 51/65 (78%)
 Frame = -3

Query: 334 HEVHVLKRSSSANSEIETSVQGAIAYCKQSQQVLSSRKNSSEVGFCSLSAARIAACEDQG 155
           +++  LKR SSAN+EIE S++GAIAYCKQSQQ+ S R+  +EVGF SLS +R A CEDQ 
Sbjct: 297 YDLQQLKRCSSANAEIEISIEGAIAYCKQSQQLFSLRETVAEVGFYSLSGSRFAVCEDQE 356

Query: 154 RPGLC 140
           RP LC
Sbjct: 357 RPALC 361


>emb|CAN80967.1| hypothetical protein VITISV_005611 [Vitis vinifera]
          Length = 363

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/65 (63%), Positives = 51/65 (78%)
 Frame = -3

Query: 334 HEVHVLKRSSSANSEIETSVQGAIAYCKQSQQVLSSRKNSSEVGFCSLSAARIAACEDQG 155
           +++  LKR SSAN+EIE S++GAIAYCKQSQQ+ S R+  +EVGF SLS +R A CEDQ 
Sbjct: 297 YDLQQLKRCSSANAEIEISIEGAIAYCKQSQQLFSLRETVAEVGFYSLSGSRFAVCEDQE 356

Query: 154 RPGLC 140
           RP LC
Sbjct: 357 RPALC 361


Top