BLASTX nr result

ID: Coptis23_contig00040186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040186
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60102.1| hypothetical protein VITISV_021670 [Vitis vinifera]    65   6e-09
ref|XP_002267531.2| PREDICTED: uncharacterized protein LOC100266...    64   1e-08
emb|CAN77459.1| hypothetical protein VITISV_022317 [Vitis vinifera]    64   1e-08
emb|CAN62529.1| hypothetical protein VITISV_029280 [Vitis vinifera]    64   2e-08
emb|CAN81103.1| hypothetical protein VITISV_003734 [Vitis vinifera]    63   2e-08

>emb|CAN60102.1| hypothetical protein VITISV_021670 [Vitis vinifera]
          Length = 2170

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1    PFLATAEALINCRNGNMSITFGNMRVDVNIFTLFRN--PGDDTEKMNDLCVVHTIANKSF 174
            PFLAT+ A+INCRNG M +TFGNM +D+NIF + +N    ++ E   +LC+++T+  + +
Sbjct: 725  PFLATSNAIINCRNGLMQLTFGNMTLDLNIFYMSKNQTTPEEEEGPEELCIINTLVEEHY 784

Query: 175  RNTHHKDPFLSCVSQLGTNYNKDSVIHQTNALLDATHPLDTGQPHKKIEDI 327
             N + +D               +S++     L ++   L T Q  +KIE+I
Sbjct: 785  -NQNMQDKL------------NESLVDFEEGLSESPTVLATLQSWRKIEEI 822


>ref|XP_002267531.2| PREDICTED: uncharacterized protein LOC100266428 [Vitis vinifera]
          Length = 1907

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = +1

Query: 1   PFLATAEALINCRNGNMSITFGNMRVDVNIFTLF-RNPGDDTEKMNDLCVVHTI 159
           PFLATA ALINCRNG M +TFGNM +++NIF L  R+P  D ++  + C++ T+
Sbjct: 739 PFLATANALINCRNGVMQLTFGNMTLELNIFHLCKRHPNQDEDEQEEACLIDTL 792


>emb|CAN77459.1| hypothetical protein VITISV_022317 [Vitis vinifera]
          Length = 1240

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1   PFLATAEALINCRNGNMSITFGNMRVDVNIFTLFR--NPGDDTEKMNDLCVVHTIANKSF 174
           PFLAT+ A+INCRNG M +TFGNM +D+NIF +++     ++ E   +LC++ T+  +  
Sbjct: 167 PFLATSNAIINCRNGLMQLTFGNMTLDLNIFYMYKKQTTPEEEEGPEELCIIDTLVEE-- 224

Query: 175 RNTHHKDPFLSCVSQLGTNYNKDSVIHQTNALLDATHPLDTGQPHKKIEDI 327
                      C   +    N +S++     L ++ + L T Q  +KIE+I
Sbjct: 225 ----------HCNQNMQDKLN-ESLVDFEKGLSESPNVLATLQSWRKIEEI 264


>emb|CAN62529.1| hypothetical protein VITISV_029280 [Vitis vinifera]
          Length = 1735

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1    PFLATAEALINCRNGNMSITFGNMRVDVNIFTLFRN--PGDDTEKMNDLCVVHTIANKSF 174
            PFLAT+ A+INCRNG M +TFGNM +D+NIF + +     ++ E   +LC++ T+  + +
Sbjct: 708  PFLATSNAIINCRNGLMQLTFGNMTLDLNIFYMSKKQITPEEEEGPEELCIIDTLVEEHY 767

Query: 175  RNTHHKDPFLSCVSQLGTNYNKDSVIHQTNALLDATHPLDTGQPHKKIEDI 327
                         +Q   N   +S+++    L +    L T Q  +KIE+I
Sbjct: 768  -------------NQNMQNKLNESLVNSEEGLSEPPTGLATLQSWRKIEEI 805


>emb|CAN81103.1| hypothetical protein VITISV_003734 [Vitis vinifera]
          Length = 1654

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +1

Query: 1   PFLATAEALINCRNGNMSITFGNMRVDVNIFTLF-RNPGDDTEKMNDLCVVHTIANKSFR 177
           PFLAT  ALINCRNG M +TFGNM +++NIF L  R+P  D ++  + C++ T+  +   
Sbjct: 322 PFLATTNALINCRNGVMQLTFGNMTLELNIFHLCKRHPNQDEDEQEEACLIDTLIEE--- 378

Query: 178 NTHHKDPFLSCVS 216
              H D F   +S
Sbjct: 379 ---HDDKFPVVIS 388


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