BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040167
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22269.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...   146   1e-33
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32

>emb|CBI22269.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/114 (64%), Positives = 91/114 (79%), Gaps = 3/114 (2%)
 Frame = -2

Query: 336 AESGLLDLGKRIHLSVERSRFRHCTKVCNTLVDMYAKCGSLDTAMHIFDGMVEKDVISWN 157
           A SGLL LGKR+H S+ER+RF+  T V N L+DMYAKCGSL+ A+ IF GMV KDV+SWN
Sbjct: 237 AVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWN 296

Query: 156 SMLHGLIFHGHGERALELFSRMRLEGALPDGVTFVGVLCACS---LVNDGRHYF 4
           +++ GL  HGHGE+AL+LFSRM+ EG +PD VTFVGVLCAC+    V++G HYF
Sbjct: 297 AIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYF 350



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
 Frame = -2

Query: 303 IHLSVERSRFRHCTKVCNTLVDMYAKCGSLDTAMHIFDGMVEKDVISWNSMLHGLIFHGH 124
           IH  VE+  F     V N+L+D Y K G L  A  +FD M E+D +SWN++L G +  G 
Sbjct: 137 IHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGE 196

Query: 123 GERALELFSRM---------RLEGALP-DGVTFVGVLCACSL 28
              A ELF +M          +E  L  D  T + +L AC++
Sbjct: 197 MNAAFELFEKMPARNVVSWSTMEAGLKFDDGTVISILSACAV 238


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/114 (64%), Positives = 91/114 (79%), Gaps = 3/114 (2%)
 Frame = -2

Query: 336 AESGLLDLGKRIHLSVERSRFRHCTKVCNTLVDMYAKCGSLDTAMHIFDGMVEKDVISWN 157
           A SGLL LGKR+H S+ER+RF+  T V N L+DMYAKCGSL+ A+ IF GMV KDV+SWN
Sbjct: 322 AVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWN 381

Query: 156 SMLHGLIFHGHGERALELFSRMRLEGALPDGVTFVGVLCACS---LVNDGRHYF 4
           +++ GL  HGHGE+AL+LFSRM+ EG +PD VTFVGVLCAC+    V++G HYF
Sbjct: 382 AIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYF 435


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  146 bits (369), Expect = 1e-33
 Identities = 74/115 (64%), Positives = 86/115 (74%), Gaps = 4/115 (3%)
 Frame = -2

Query: 336 AESGLLDLGKRIHLSVERSRFRHCTKVCNTLVDMYAKCGSLDTAMHIFDGMV-EKDVISW 160
           AESG+L LGKRIH S+ R RFR  TKV N  +DMYAKCG LD A  +F GM+ +KDV+SW
Sbjct: 327 AESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSW 386

Query: 159 NSMLHGLIFHGHGERALELFSRMRLEGALPDGVTFVGVLCACS---LVNDGRHYF 4
           NSM+ G   HGHGE+ALELFSRM  EG  PD  TFVG+LCAC+   LVN+GR YF
Sbjct: 387 NSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYF 441



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
 Frame = -2

Query: 321 LDLGKRIHLSVERSRFRHCTKVCNTLVDMYAKCGS--LDTAMHIFDGMVEKDVISWNSML 148
           L L + IH  VE+  F     V N+L+D Y++CGS  LD AM +F  M E+DV++WNSM+
Sbjct: 136 LPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMI 195

Query: 147 HGLIFHGHGERALELFSRM 91
            GL+  G  E A +LF  M
Sbjct: 196 GGLVRCGELEGACKLFDEM 214



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/54 (44%), Positives = 35/54 (64%)
 Frame = -2

Query: 252 NTLVDMYAKCGSLDTAMHIFDGMVEKDVISWNSMLHGLIFHGHGERALELFSRM 91
           N+++    +CG L+ A  +FD M E+D++SWN+ML G    G  +RA ELF RM
Sbjct: 192 NSMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERM 245


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/115 (62%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
 Frame = -2

Query: 336 AESGLLDLGKRIHLSVERSRFRHCTKVCNTLVDMYAKCGSLDTAMHIFDGMV-EKDVISW 160
           AESG+L LGKRIH S+ R RFR   KV N  +DMYAKCG LD A  +F GM+ +KDV+SW
Sbjct: 327 AESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSW 386

Query: 159 NSMLHGLIFHGHGERALELFSRMRLEGALPDGVTFVGVLCACS---LVNDGRHYF 4
           NSM+ G   HGHGE+ALELFS M  EG  PD  TFVG+LCAC+   LVN+GR YF
Sbjct: 387 NSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYF 441



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
 Frame = -2

Query: 321 LDLGKRIHLSVERSRFRHCTKVCNTLVDMYAKCGS--LDTAMHIFDGMVEKDVISWNSML 148
           L L + IH  VE+  F     V N+L+D Y++CG+  LD AM +F  M E+DV++WNSM+
Sbjct: 136 LPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMI 195

Query: 147 HGLIFHGHGERALELFSRM 91
            GL+  G  + A +LF  M
Sbjct: 196 GGLVRCGELQGACKLFDEM 214


>ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|222848341|gb|EEE85888.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/115 (59%), Positives = 84/115 (73%), Gaps = 3/115 (2%)
 Frame = -2

Query: 336 AESGLLDLGKRIHLSVERSRFRHCTKVCNTLVDMYAKCGSLDTAMHIFDGMVEKDVISWN 157
           AESGLL LGKR+H S+ER R++    V N LVDMYAKCG +D A+ +F+GM +KD++SWN
Sbjct: 151 AESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWN 210

Query: 156 SMLHGLIFHGHGERALELFSRMRLEGALPDGVTFVGVLCAC---SLVNDGRHYFS 1
            ML GL  HGHGE+AL+LFS MR EG  PD VT V VLCAC     V++G  YF+
Sbjct: 211 CMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFN 265