BLASTX nr result

ID: Coptis23_contig00040157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040157
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66035.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   2e-07
ref|XP_002526851.1| conserved hypothetical protein [Ricinus comm...    55   6e-06

>emb|CCA66035.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 465

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
 Frame = +3

Query: 18  KERFNYEDVKSASREVGSFMELDRNGITVLNSPAARVKVSLNIRELVKETI-LEFDNKSR 194
           K R N  +VK+   ++GSF+ +D++G   ++  + R++V  ++R+ +  +I +   +   
Sbjct: 160 KGRLNINNVKAIGNKIGSFITMDKSGAMGIDK-SIRIRVMHDVRKPLSSSIKVRMKSGEE 218

Query: 195 IPVKFKYERLPFFCFFCGIIGHEMKNC---SVKEKYIARFG 308
                KYER P FCF+CG +GH  K+C     ++K + ++G
Sbjct: 219 DIFTVKYERPPLFCFYCGKVGHGTKDCEEDDAEDKGVVKYG 259


>ref|XP_002526851.1| conserved hypothetical protein [Ricinus communis]
           gi|223533750|gb|EEF35482.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 335

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
 Frame = +3

Query: 36  EDVKSASREVGSFMELDRNGITVLNSPAARVKVSLNIRE-LVKETILEFDNKSRIPVKFK 212
           E +K+    +G+ +++D   +  L   + R+++ +++R+ L K T +   +   + V F+
Sbjct: 7   EAIKAIGARIGTVLDIDDTSMEGLER-SVRLRIRIDLRKPLRKRTKIAMGSNKDMWVFFR 65

Query: 213 YERLPFFCFFCGIIGHEMKNCSVKEKYIARFGYDYSETK 329
           YERLP FC+ CG +GH M++C  + +     GYD  + K
Sbjct: 66  YERLPSFCYVCGCLGHVMRDCDSRTE---DDGYDAMDEK 101


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