BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040156
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec...    60   1e-07
ref|XP_002305092.1| glutamate-gated kainate-type ion channel rec...    59   4e-07
ref|XP_002331971.1| glutamate-gated kainate-type ion channel rec...    59   5e-07
ref|XP_002316840.1| glutamate-gated kainate-type ion channel rec...    58   9e-07

>ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848057|gb|EEE85604.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 931

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/46 (65%), Positives = 37/46 (80%)
 Frame = +3

Query: 81  ITNIGAIIDVSSRIGKEEKVSMEIAIQTINNASSNKHKLGLHVRDT 218
           +TNIGAIIDV+SR GKEEK +MEIA+Q  NN S  KHKL L+ +D+
Sbjct: 51  VTNIGAIIDVNSRTGKEEKTAMEIAVQKFNNGSP-KHKLSLYFQDS 95


>ref|XP_002305092.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848056|gb|EEE85603.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 942

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = +3

Query: 81  ITNIGAIIDVSSRIGKEEKVSMEIAIQTINNASSNKHKLGLHVR 212
           +TNIGAIIDV+SRIGKEEK ++E+A+Q  N+ S+N H+L LH R
Sbjct: 55  VTNIGAIIDVNSRIGKEEKTALELAVQDFNDISTN-HELSLHFR 97


>ref|XP_002331971.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222874748|gb|EEF11879.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 407

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = +3

Query: 81  ITNIGAIIDVSSRIGKEEKVSMEIAIQTINNASSNKHKLGLHVRD 215
           +TNIGAIID +SR GKEEK +MEIA+Q  NN S N HKL LH ++
Sbjct: 55  VTNIGAIIDGNSRTGKEEKTAMEIAVQNFNNISRN-HKLSLHFKN 98


>ref|XP_002316840.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222859905|gb|EEE97452.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 838

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/44 (65%), Positives = 34/44 (77%)
 Frame = +3

Query: 81  ITNIGAIIDVSSRIGKEEKVSMEIAIQTINNASSNKHKLGLHVR 212
           +TNIGAIID +SR GKEEK +MEIA+Q  NN S N HKL LH +
Sbjct: 55  VTNIGAIIDGNSRSGKEEKTAMEIAVQNFNNISRN-HKLSLHFK 97