BLASTX nr result

ID: Coptis23_contig00040150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040150
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW80126.1| hybrid proline-rich protein [Gossypium hirsutum]        72   4e-11
ref|XP_002285197.1| PREDICTED: putative lipid-binding protein At...    68   9e-10
ref|NP_001236284.1| uncharacterized protein LOC100526941 precurs...    64   1e-08
gb|ABK95939.1| unknown [Populus trichocarpa]                           64   1e-08
ref|XP_002309638.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>gb|ADW80126.1| hybrid proline-rich protein [Gossypium hirsutum]
          Length = 122

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/82 (46%), Positives = 48/82 (58%)
 Frame = +2

Query: 71  FIATFTSACNTCKTXXXXXXXXXXXXXXDLFCPMDILKLGMCGNLLNSGLRNLVVGGQPS 250
           F +TFT+ACN+CK                  CP D LKLG+C ++L  GL N++VG  PS
Sbjct: 17  FHSTFTTACNSCKPKPPPCPPPS--------CPKDTLKLGVCADVL--GLVNVIVGTPPS 66

Query: 251 SQCCALFDGLDDLGAVTCICEA 316
           S+CCAL  GL DL A  C+C A
Sbjct: 67  SKCCALLQGLADLEAALCLCTA 88


>ref|XP_002285197.1| PREDICTED: putative lipid-binding protein At4g00165 [Vitis
           vinifera]
          Length = 128

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/80 (43%), Positives = 45/80 (56%)
 Frame = +2

Query: 77  ATFTSACNTCKTXXXXXXXXXXXXXXDLFCPMDILKLGMCGNLLNSGLRNLVVGGQPSSQ 256
           +TF+SAC  C+                 FCP D LK G+C +LL  GL +LV G  PSS+
Sbjct: 19  STFSSACGPCQPKPTPPAKAPPANP---FCPRDTLKFGVCADLLG-GLVSLVAGSPPSSK 74

Query: 257 CCALFDGLDDLGAVTCICEA 316
           CCA+ +GL DL A  C+C A
Sbjct: 75  CCAVLEGLADLEAAACLCTA 94


>ref|NP_001236284.1| uncharacterized protein LOC100526941 precursor [Glycine max]
           gi|255631195|gb|ACU15963.1| unknown [Glycine max]
          Length = 184

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/51 (60%), Positives = 35/51 (68%)
 Frame = +2

Query: 164 CPMDILKLGMCGNLLNSGLRNLVVGGQPSSQCCALFDGLDDLGAVTCICEA 316
           CP D LKLG C +LL  GL N++VG  PSSQCCAL  GL DL A  C+C A
Sbjct: 94  CPKDTLKLGACADLL--GLVNIIVGTPPSSQCCALIKGLADLEAALCLCTA 142


>gb|ABK95939.1| unknown [Populus trichocarpa]
          Length = 121

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/82 (41%), Positives = 43/82 (52%)
 Frame = +2

Query: 71  FIATFTSACNTCKTXXXXXXXXXXXXXXDLFCPMDILKLGMCGNLLNSGLRNLVVGGQPS 250
           F +TF+SAC  C+                  CP D LKLG C ++L  GL N+VVG  P 
Sbjct: 17  FFSTFSSACGPCQPKTPPTEPT---------CPRDTLKLGACADIL--GLVNVVVGSPPY 65

Query: 251 SQCCALFDGLDDLGAVTCICEA 316
           S+CC L +GL DL    C+C A
Sbjct: 66  SKCCPLLEGLADLEVALCLCTA 87


>ref|XP_002309638.1| predicted protein [Populus trichocarpa] gi|222855614|gb|EEE93161.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/82 (40%), Positives = 46/82 (56%)
 Frame = +2

Query: 71  FIATFTSACNTCKTXXXXXXXXXXXXXXDLFCPMDILKLGMCGNLLNSGLRNLVVGGQPS 250
           F++TF+SAC+ C                   CP D LKLG+C +LL  G  N+V G  P 
Sbjct: 17  FLSTFSSACDPCHPKPKPKPSPPTAPT----CPKDTLKLGVCADLL--GPVNVVAGTPPY 70

Query: 251 SQCCALFDGLDDLGAVTCICEA 316
           S+CC+L +GL D+ A +C+C A
Sbjct: 71  SKCCSLLEGLADMEAASCLCTA 92


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