BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040141
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_002332376.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002331487.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago t...    65   4e-09

>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/59 (71%), Positives = 47/59 (79%)
 Frame = +1

Query: 163 HPCLIQLEKCSNMSDLKQIHAQMLRTGYFSHVFYASQMIAFCALEDSGSLHYARLVFTQ 339
           HPCL+ LEKC+ MS LKQIHAQMLRT  F   F AS+++AFCAL DSGSL YARLVF Q
Sbjct: 41  HPCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQ 99


>ref|XP_002332376.1| predicted protein [Populus trichocarpa] gi|222832200|gb|EEE70677.1|
           predicted protein [Populus trichocarpa]
          Length = 660

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/47 (70%), Positives = 40/47 (85%)
 Frame = +1

Query: 199 MSDLKQIHAQMLRTGYFSHVFYASQMIAFCALEDSGSLHYARLVFTQ 339
           MS LKQIHAQMLRTG F   F AS+++AFC+L++SGSL YARLVF+Q
Sbjct: 1   MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQ 47


>ref|XP_002331487.1| predicted protein [Populus trichocarpa] gi|222873565|gb|EEF10696.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/59 (49%), Positives = 42/59 (71%)
 Frame = +1

Query: 163 HPCLIQLEKCSNMSDLKQIHAQMLRTGYFSHVFYASQMIAFCALEDSGSLHYARLVFTQ 339
           HP L+ +E C++M  LKQI A M +T   SH F  S+++AFCAL DSG +++A L+F+Q
Sbjct: 51  HPILLAMESCTSMLQLKQIQAHMTKTALISHTFPVSRVLAFCALSDSGDINHAHLLFSQ 109


>ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 675

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/59 (50%), Positives = 42/59 (71%)
 Frame = +1

Query: 163 HPCLIQLEKCSNMSDLKQIHAQMLRTGYFSHVFYASQMIAFCALEDSGSLHYARLVFTQ 339
           +P L+ L+ CS+M  LKQI A +  TG  + +F AS+++AFCAL DSG +HYA L+F Q
Sbjct: 53  NPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQ 111


>ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355500337|gb|AES81540.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 1024

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/59 (50%), Positives = 39/59 (66%)
 Frame = +1

Query: 163 HPCLIQLEKCSNMSDLKQIHAQMLRTGYFSHVFYASQMIAFCALEDSGSLHYARLVFTQ 339
           +P L+ +E CS M  LKQI A+M  TG  +H F  S++IAFCAL  SG LHYA  +F +
Sbjct: 158 NPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNR 216