BLASTX nr result

ID: Coptis23_contig00040136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040136
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15290.3| unnamed protein product [Vitis vinifera]               51   2e-07
ref|XP_002266656.1| PREDICTED: uncharacterized protein LOC100256...    51   3e-07
ref|XP_003550763.1| PREDICTED: uncharacterized protein LOC100800...    47   1e-05

>emb|CBI15290.3| unnamed protein product [Vitis vinifera]
          Length = 1552

 Score = 50.8 bits (120), Expect(2) = 2e-07
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = -2

Query: 473 NPEWSLWKCCQCGEKFSDPESHLQHVLTSHLHEL 372
           N  W  W CC+CGEKF D E H+QHV+  H+  L
Sbjct: 338 NKVWKFWVCCRCGEKFKDSELHMQHVVQEHMGNL 371



 Score = 28.9 bits (63), Expect(2) = 2e-07
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 331 VDSYWVSAIVDKT*EPLDTSAAVQALEKHVGWLLEA 224
           +D+ W+  IV+ + +PLD SAAV+ L+    +  E+
Sbjct: 383 IDNEWIEMIVNCSWKPLDISAAVKMLKNESKYAWES 418


>ref|XP_002266656.1| PREDICTED: uncharacterized protein LOC100256959 [Vitis vinifera]
          Length = 1653

 Score = 50.8 bits (120), Expect(2) = 3e-07
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = -2

Query: 473 NPEWSLWKCCQCGEKFSDPESHLQHVLTSHLHEL 372
           N  W  W CC+CGEKF D E H+QHV+  H+  L
Sbjct: 388 NKVWKFWVCCRCGEKFKDSELHMQHVVQEHMGNL 421



 Score = 28.5 bits (62), Expect(2) = 3e-07
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -3

Query: 331 VDSYWVSAIVDKT*EPLDTSAAVQALE 251
           +D+ W+  IV+ + +PLD SAAV+ L+
Sbjct: 433 IDNEWIEMIVNCSWKPLDISAAVKMLK 459


>ref|XP_003550763.1| PREDICTED: uncharacterized protein LOC100800030 [Glycine max]
          Length = 1611

 Score = 47.0 bits (110), Expect(2) = 1e-05
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -2

Query: 473 NPEWSLWKCCQCGEKFSDPESHLQHVLTSHLHEL 372
           N  W  W+CC C EK S+P+SH  HV+  H+  L
Sbjct: 385 NKTWKFWRCCNCEEKHSNPDSHRHHVVQEHMGSL 418



 Score = 26.9 bits (58), Expect(2) = 1e-05
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 331 VDSYWVSAIVDKT*EPLDTSAAVQALE 251
           VDS W+  I++ +  PLD  AAV+ L+
Sbjct: 430 VDSEWIEMILNCSWNPLDVLAAVRMLD 456


Top