BLASTX nr result
ID: Coptis23_contig00040120
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00040120
(379 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC46935.1| polyubiquitin, partial [Trichomonas vaginalis] 76 2e-12
gb|AFD53810.1| ubiquitin, partial [Trichoderma harzianum] 75 4e-12
gb|EGV99218.1| Ubiquitin [Cricetulus griseus] 75 7e-12
ref|XP_001637624.1| predicted protein [Nematostella vectensis] g... 75 7e-12
gb|AAQ94569.1| ubiquitin C [Danio rerio] 75 7e-12
>gb|AAC46935.1| polyubiquitin, partial [Trichomonas vaginalis]
Length = 770
Score = 76.3 bits (186), Expect = 2e-12
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 IGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYIS 192
I D+K + D EG Q +L++AG+ LED LQ+Y I DST++++ + I++
Sbjct: 640 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVK 699
Query: 193 LPWITAL-VTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
+T +T+ V D I+DVKA I++KEG + L++ G+ L D K L Y I +
Sbjct: 700 T--LTGKHITLEVEPTDRIEDVKAKIQVKEGIPPDQQGLIFAGKQLEDGKTLQDYSIQKD 757
Query: 370 SIL 378
S L
Sbjct: 758 STL 760
Score = 72.4 bits (176), Expect = 4e-11
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 IGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYIS 192
I D+K + D EG Q +L++AG+ LED LQ+Y I DST++++ + I++
Sbjct: 32 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVK 91
Query: 193 LPWITAL-VTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
+T +T+ V D I+DVKA I+ KEG + L++ G+ L D L Y I +
Sbjct: 92 T--LTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKD 149
Query: 370 SIL 378
S L
Sbjct: 150 STL 152
Score = 72.4 bits (176), Expect = 4e-11
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 IGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYIS 192
I D+K + D EG Q +L++AG+ LED LQ+Y I DST++++ + I++
Sbjct: 108 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVK 167
Query: 193 LPWITAL-VTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
+T +T+ V D I+DVKA I+ KEG + L++ G+ L D L Y I +
Sbjct: 168 T--LTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKD 225
Query: 370 SIL 378
S L
Sbjct: 226 STL 228
Score = 72.4 bits (176), Expect = 4e-11
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 IGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYIS 192
I D+K + D EG Q +L++AG+ LED LQ+Y I DST++++ + I++
Sbjct: 184 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVK 243
Query: 193 LPWITAL-VTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
+T +T+ V D I+DVKA I+ KEG + L++ G+ L D L Y I +
Sbjct: 244 T--LTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKD 301
Query: 370 SIL 378
S L
Sbjct: 302 STL 304
Score = 72.4 bits (176), Expect = 4e-11
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 IGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYIS 192
I D+K + D EG Q +L++AG+ LED LQ+Y I DST++++ + I++
Sbjct: 260 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVK 319
Query: 193 LPWITAL-VTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
+T +T+ V D I+DVKA I+ KEG + L++ G+ L D L Y I +
Sbjct: 320 T--LTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKD 377
Query: 370 SIL 378
S L
Sbjct: 378 STL 380
Score = 72.4 bits (176), Expect = 4e-11
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 IGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYIS 192
I D+K + D EG Q +L++AG+ LED LQ+Y I DST++++ + I++
Sbjct: 336 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVK 395
Query: 193 LPWITAL-VTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
+T +T+ V D I+DVKA I+ KEG + L++ G+ L D L Y I +
Sbjct: 396 T--LTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKD 453
Query: 370 SIL 378
S L
Sbjct: 454 STL 456
Score = 72.4 bits (176), Expect = 4e-11
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 IGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYIS 192
I D+K + D EG Q +L++AG+ LED LQ+Y I DST++++ + I++
Sbjct: 412 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVK 471
Query: 193 LPWITAL-VTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
+T +T+ V D I+DVKA I+ KEG + L++ G+ L D L Y I +
Sbjct: 472 T--LTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKD 529
Query: 370 SIL 378
S L
Sbjct: 530 STL 532
Score = 72.4 bits (176), Expect = 4e-11
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 IGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYIS 192
I D+K + D EG Q +L++AG+ LED LQ+Y I DST++++ + I++
Sbjct: 488 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVK 547
Query: 193 LPWITAL-VTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
+T +T+ V D I+DVKA I+ KEG + L++ G+ L D L Y I +
Sbjct: 548 T--LTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKD 605
Query: 370 SIL 378
S L
Sbjct: 606 STL 608
Score = 72.4 bits (176), Expect = 4e-11
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 IGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYIS 192
I D+K + D EG Q +L++AG+ LED LQ+Y I DST++++ + I++
Sbjct: 564 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVK 623
Query: 193 LPWITAL-VTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
+T +T+ V D I+DVKA I+ KEG + L++ G+ L D L Y I +
Sbjct: 624 T--LTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKD 681
Query: 370 SIL 378
S L
Sbjct: 682 STL 684
>gb|AFD53810.1| ubiquitin, partial [Trichoderma harzianum]
Length = 264
Score = 75.5 bits (184), Expect = 4e-12
Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +1
Query: 10 TIGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYI 189
TI ++K + D EG Q +L++AG+ LED + L +Y I +ST++++ + I++
Sbjct: 27 TIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 86
Query: 190 -SLPWITALVTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHP 366
+L W T VT+ V DTI +VK+ I+ KEG + L++ G+ L D + L+ Y+I
Sbjct: 87 KTLTWKT--VTLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 144
Query: 367 NSIL 378
S L
Sbjct: 145 ESTL 148
Score = 69.7 bits (169), Expect = 2e-10
Identities = 39/123 (31%), Positives = 67/123 (54%)
Frame = +1
Query: 10 TIGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYI 189
TI ++K + D EG Q +L++AG+ LED + L +Y I +ST++++ + I++
Sbjct: 103 TIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 162
Query: 190 SLPWITALVTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
+T+ V DTI +VK+ I+ KEG + L++ G+ L D + L+ Y I
Sbjct: 163 K-TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQXE 221
Query: 370 SIL 378
S L
Sbjct: 222 STL 224
>gb|EGV99218.1| Ubiquitin [Cricetulus griseus]
Length = 430
Score = 74.7 bits (182), Expect = 7e-12
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +1
Query: 10 TIGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYI 189
TI ++K + D EG Q +L++AG+ LED + L +Y I +ST++++ + I++
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 81
Query: 190 SLPWITA-LVTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHP 366
+T +T+ V DTI++VKA I+ KEG + L++ G+ L D +PL+ Y+I
Sbjct: 82 KT--LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQK 139
Query: 367 NSIL 378
S L
Sbjct: 140 ESTL 143
Score = 73.6 bits (179), Expect = 2e-11
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +1
Query: 10 TIGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYI 189
TI ++K + D EG Q +L++AG+ LED + L +Y I +ST++++ + I++
Sbjct: 98 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFV 157
Query: 190 SLPWITA-LVTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHP 366
+T +T+ V DTI++VKA I+ KEG + L++ G+ L D +PL+ Y+I
Sbjct: 158 KT--LTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQK 215
Query: 367 NSIL 378
S L
Sbjct: 216 ESTL 219
Score = 73.6 bits (179), Expect = 2e-11
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +1
Query: 10 TIGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYI 189
TI ++K + D EG Q +L++AG+ LED + L +Y I +ST++++ + I++
Sbjct: 174 TIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFV 233
Query: 190 SLPWITA-LVTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHP 366
+T +T+ V DTI++VKA I+ KEG + L++ G+ L D +PL+ Y+I
Sbjct: 234 KT--LTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQK 291
Query: 367 NSIL 378
S L
Sbjct: 292 ESTL 295
Score = 73.6 bits (179), Expect = 2e-11
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +1
Query: 10 TIGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYI 189
TI ++K + D EG Q +L++AG+ LED + L +Y I +ST++++ + I++
Sbjct: 250 TIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFV 309
Query: 190 SLPWITA-LVTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHP 366
+T +T+ V DTI++VKA I+ KEG + L++ G+ L D +PL+ Y+I
Sbjct: 310 KT--LTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQK 367
Query: 367 NSIL 378
S L
Sbjct: 368 ESTL 371
>ref|XP_001637624.1| predicted protein [Nematostella vectensis]
gi|156224738|gb|EDO45561.1| predicted protein
[Nematostella vectensis]
Length = 147
Score = 74.7 bits (182), Expect = 7e-12
Identities = 42/123 (34%), Positives = 69/123 (56%)
Frame = +1
Query: 10 TIGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYI 189
TI ++K + D EG Q +L++AG+ LED + L +Y I +ST++++ + I +
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQISV 81
Query: 190 SLPWITALVTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
W T T++V DT++ VK I+ +EG + L+Y E L+D + LA Y+I
Sbjct: 82 KAHWKT--FTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQG 139
Query: 370 SIL 378
SIL
Sbjct: 140 SIL 142
>gb|AAQ94569.1| ubiquitin C [Danio rerio]
Length = 235
Score = 74.7 bits (182), Expect = 7e-12
Identities = 41/123 (33%), Positives = 70/123 (56%)
Frame = +1
Query: 10 TIGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYI 189
TI ++K + D EG Q +L++AG+ LED + L +Y I +ST++++ + I++
Sbjct: 98 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 157
Query: 190 SLPWITALVTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
P +T+ V DTI++VKA I+ KEG + L++ G+ L D + L+ Y+I
Sbjct: 158 K-PLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216
Query: 370 SIL 378
S L
Sbjct: 217 STL 219
Score = 71.6 bits (174), Expect = 6e-11
Identities = 40/123 (32%), Positives = 69/123 (56%)
Frame = +1
Query: 10 TIGDIKGIVYDFEGYNDYQTKLLYAGEVLEDHKELQEYGISSDSTIYMISHSSEKIPIYI 189
TI ++K + D EG Q +L++AG+ LED + L +Y I +ST++++ + I++
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 81
Query: 190 SLPWITALVTINVNEWDTIKDVKASIEIKEGCLSEGLTLVYNGEHLIDAKPLATYDIHPN 369
+T+ V DTI++VKA I+ KEG + L++ G+ L D + L+ Y+I
Sbjct: 82 K-TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
Query: 370 SIL 378
S L
Sbjct: 141 STL 143