BLASTX nr result

ID: Coptis23_contig00040115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040115
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24628.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002269854.1| PREDICTED: structural maintenance of chromos...   127   7e-28
emb|CAN68529.1| hypothetical protein VITISV_032933 [Vitis vinifera]   127   7e-28
ref|XP_004165033.1| PREDICTED: structural maintenance of chromos...   125   4e-27
ref|XP_004148146.1| PREDICTED: structural maintenance of chromos...   125   4e-27

>emb|CBI24628.3| unnamed protein product [Vitis vinifera]
          Length = 1171

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/93 (64%), Positives = 79/93 (84%)
 Frame = +3

Query: 6   MQYMKWANGNTELDRLKRFCVAFEFVEAEKKRDNSLNGVEQVKAKIAEIDNDAARMQGEI 185
           MQYM+WANGN ELDRLKRFC+A+EFV+AEK RD++++GVEQVK KIA+I++   RMQ EI
Sbjct: 170 MQYMQWANGNAELDRLKRFCIAYEFVQAEKIRDSAVSGVEQVKTKIADIEDSHKRMQVEI 229

Query: 186 QDLETKITVLTIEKDKMAGGEVKTLSEKVDSLA 284
           Q++ET+++ LT EK+   GGEVK LSE VD+L+
Sbjct: 230 QEMETQVSNLTAEKEASMGGEVKVLSENVDALS 262


>ref|XP_002269854.1| PREDICTED: structural maintenance of chromosomes protein 2-1 [Vitis
           vinifera]
          Length = 1176

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/93 (64%), Positives = 79/93 (84%)
 Frame = +3

Query: 6   MQYMKWANGNTELDRLKRFCVAFEFVEAEKKRDNSLNGVEQVKAKIAEIDNDAARMQGEI 185
           MQYM+WANGN ELDRLKRFC+A+EFV+AEK RD++++GVEQVK KIA+I++   RMQ EI
Sbjct: 215 MQYMQWANGNAELDRLKRFCIAYEFVQAEKIRDSAVSGVEQVKTKIADIEDSHKRMQVEI 274

Query: 186 QDLETKITVLTIEKDKMAGGEVKTLSEKVDSLA 284
           Q++ET+++ LT EK+   GGEVK LSE VD+L+
Sbjct: 275 QEMETQVSNLTAEKEASMGGEVKVLSENVDALS 307


>emb|CAN68529.1| hypothetical protein VITISV_032933 [Vitis vinifera]
          Length = 1137

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/93 (64%), Positives = 79/93 (84%)
 Frame = +3

Query: 6   MQYMKWANGNTELDRLKRFCVAFEFVEAEKKRDNSLNGVEQVKAKIAEIDNDAARMQGEI 185
           MQYM+WANGN ELDRLKRFC+A+EFV+AEK RD++++GVEQVK KIA+I++   RMQ EI
Sbjct: 215 MQYMQWANGNAELDRLKRFCIAYEFVQAEKIRDSAVSGVEQVKTKIADIEDSHKRMQVEI 274

Query: 186 QDLETKITVLTIEKDKMAGGEVKTLSEKVDSLA 284
           Q++ET+++ LT EK+   GGEVK LSE VD+L+
Sbjct: 275 QEMETQVSNLTAEKEASMGGEVKVLSENVDALS 307


>ref|XP_004165033.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
           [Cucumis sativus]
          Length = 1176

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/93 (63%), Positives = 77/93 (82%)
 Frame = +3

Query: 6   MQYMKWANGNTELDRLKRFCVAFEFVEAEKKRDNSLNGVEQVKAKIAEIDNDAARMQGEI 185
           +QYM+W+NGN +LDRLKRFC+A+E+V+A+  RDN+ + VEQ+KA I+EID+   RMQ EI
Sbjct: 215 IQYMQWSNGNADLDRLKRFCIAYEYVQAKNVRDNAASHVEQMKANISEIDDGTVRMQLEI 274

Query: 186 QDLETKITVLTIEKDKMAGGEVKTLSEKVDSLA 284
           +DLETKIT LT EK+   GGEVKTL+EKVD L+
Sbjct: 275 KDLETKITTLTAEKEASMGGEVKTLTEKVDRLS 307


>ref|XP_004148146.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
           [Cucumis sativus]
          Length = 1176

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/93 (63%), Positives = 77/93 (82%)
 Frame = +3

Query: 6   MQYMKWANGNTELDRLKRFCVAFEFVEAEKKRDNSLNGVEQVKAKIAEIDNDAARMQGEI 185
           +QYM+W+NGN +LDRLKRFC+A+E+V+A+  RDN+ + VEQ+KA I+EID+   RMQ EI
Sbjct: 215 IQYMQWSNGNADLDRLKRFCIAYEYVQAKNVRDNAASQVEQMKANISEIDDGTVRMQLEI 274

Query: 186 QDLETKITVLTIEKDKMAGGEVKTLSEKVDSLA 284
           +DLETKIT LT EK+   GGEVKTL+EKVD L+
Sbjct: 275 KDLETKITTLTAEKEASMGGEVKTLTEKVDRLS 307


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