BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040113
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83791.1| hypothetical protein VITISV_031681 [Vitis vinifera]    77   1e-12
emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera]    76   2e-12
gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...    76   3e-12
dbj|BAD18986.1| GAG-POL precursor [Vitis vinifera] gi|109659801|...    75   4e-12
emb|CAN83045.1| hypothetical protein VITISV_015525 [Vitis vinifera]    75   4e-12

>emb|CAN83791.1| hypothetical protein VITISV_031681 [Vitis vinifera]
          Length = 968

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/73 (49%), Positives = 54/73 (73%)
 Frame = +2

Query: 53  WRVFADGSATDT*NGIGVGLVTPENNRLELSMKLGFATSNNESEYEAVIAGLDLAKDLGV 232
           W +  DG++  + +G+G+ L +P    LE +++LGF+TSNNE+EYEA+++GLDLA  L V
Sbjct: 431 WTLRVDGASRSSGSGVGLLLRSPTGEHLEQAIRLGFSTSNNEAEYEAILSGLDLALTLSV 490

Query: 233 EELSVFSDSNLVV 271
            +L +FSDS LVV
Sbjct: 491 SKLRIFSDSQLVV 503


>emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera]
          Length = 987

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/73 (50%), Positives = 53/73 (72%)
 Frame = +2

Query: 53  WRVFADGSATDT*NGIGVGLVTPENNRLELSMKLGFATSNNESEYEAVIAGLDLAKDLGV 232
           W +  DG++  + +GIG+ L +P    LE +++LGF+ SNNE+EYEA+++GLDLA  L V
Sbjct: 454 WTLRVDGASRSSGSGIGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSV 513

Query: 233 EELSVFSDSNLVV 271
            +L VFSDS LVV
Sbjct: 514 SKLRVFSDSQLVV 526


>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/75 (46%), Positives = 51/75 (68%)
 Frame = +2

Query: 53  WRVFADGSATDT*NGIGVGLVTPENNRLELSMKLGFATSNNESEYEAVIAGLDLAKDLGV 232
           W +  DGS+    +G+G+ L +P    +E S++LGF  SNNESEYEA+IAG+ LA++ G+
Sbjct: 643 WLLHVDGSSNRQGSGVGIQLTSPTGEVIEQSLQLGFNASNNESEYEALIAGIKLAQEKGI 702

Query: 233 EELSVFSDSNLVVCQ 277
            E+  +SDS LV  Q
Sbjct: 703 REIHAYSDSQLVTSQ 717


>dbj|BAD18986.1| GAG-POL precursor [Vitis vinifera] gi|109659801|dbj|BAE96746.1|
           GAG-POL precursor [Vitis vinifera]
           gi|109659805|dbj|BAE96749.1| GAG-POL precursor [Vitis
           vinifera] gi|221271542|dbj|BAH15077.1| GAG-POL precursor
           [Vitis vinifera]
          Length = 1027

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/73 (47%), Positives = 53/73 (72%)
 Frame = +2

Query: 53  WRVFADGSATDT*NGIGVGLVTPENNRLELSMKLGFATSNNESEYEAVIAGLDLAKDLGV 232
           W +  DG++  + +G+G+ L +P    LE +++LGF+ SNNE+EYEA+++GLDLA  L V
Sbjct: 454 WTLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSV 513

Query: 233 EELSVFSDSNLVV 271
            +L +FSDS LVV
Sbjct: 514 SKLRIFSDSQLVV 526


>emb|CAN83045.1| hypothetical protein VITISV_015525 [Vitis vinifera]
          Length = 873

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/73 (47%), Positives = 53/73 (72%)
 Frame = +2

Query: 53  WRVFADGSATDT*NGIGVGLVTPENNRLELSMKLGFATSNNESEYEAVIAGLDLAKDLGV 232
           W +  DG++  + +G+G+ L +P    LE +++LGF+ SNNE+EYEA+++GLDLA  L V
Sbjct: 423 WTLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSV 482

Query: 233 EELSVFSDSNLVV 271
            +L +FSDS LVV
Sbjct: 483 SKLRIFSDSQLVV 495