BLASTX nr result

ID: Coptis23_contig00040101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040101
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera]    55   1e-09
emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]    57   7e-09
emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera]    55   3e-08
emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]    56   7e-08
emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]    56   9e-08

>emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera]
          Length = 1539

 Score = 55.5 bits (132), Expect(2) = 1e-09
 Identities = 23/56 (41%), Positives = 34/56 (60%)
 Frame = +1

Query: 1   IWKAKLHPSTQAIGWKIFQGIRHTDDKLKKRNFKIASRCCMCLQHEETQDHILFRC 168
           IWK  + P     GW+   G   T D+L++R + +A+RC +C +HEE+ DHIL  C
Sbjct: 276 IWKVTVQPRVSFFGWEATWGKALTLDQLQRRGWALANRCYLCQRHEESIDHILLHC 331



 Score = 32.0 bits (71), Expect(2) = 1e-09
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 279 KDIWTAAAIACLVHIWKTRNRVLYDD 356
           KD+W A+ +     +WKTRN+V +++
Sbjct: 357 KDVWKASPLCLFWTVWKTRNKVAFEE 382


>emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]
          Length = 577

 Score = 56.6 bits (135), Expect(2) = 7e-09
 Identities = 24/60 (40%), Positives = 36/60 (60%)
 Frame = +1

Query: 1   IWKAKLHPSTQAIGWKIFQGIRHTDDKLKKRNFKIASRCCMCLQHEETQDHILFRCTFAK 180
           IWK  + P     GW+   G   T D+L++R + +A+RC +C +HEE+ DHIL  C  A+
Sbjct: 434 IWKVSVQPRVSFFGWEATWGKTLTLDQLQRRGWALANRCYLCQRHEESIDHILLHCDKAR 493



 Score = 28.1 bits (61), Expect(2) = 7e-09
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 279 KDIWTAAAIACLVHIWKTRNRVLYDD 356
           K +W A+ +     +WKTRN+V + +
Sbjct: 530 KGVWKASPLCLFWTVWKTRNKVAFKE 555


>emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera]
          Length = 793

 Score = 55.5 bits (132), Expect(2) = 3e-08
 Identities = 24/60 (40%), Positives = 35/60 (58%)
 Frame = +1

Query: 1   IWKAKLHPSTQAIGWKIFQGIRHTDDKLKKRNFKIASRCCMCLQHEETQDHILFRCTFAK 180
           IW   + P     GW+   G   T D+L+KR + +A+RC +C +HEE+ DHIL  C  A+
Sbjct: 656 IWNVYVQPRVSFFGWEATWGKALTLDQLQKRGWPLANRCYLCQRHEESIDHILLHCAKAR 715



 Score = 26.9 bits (58), Expect(2) = 3e-08
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 279 KDIWTAAAIACLVHIWKTRNRVLYDD 356
           K +W A  +     +WK RN+V++++
Sbjct: 752 KGVWRANPLCLFWMVWKVRNKVVFEE 777


>emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]
          Length = 1636

 Score = 55.8 bits (133), Expect(2) = 7e-08
 Identities = 22/61 (36%), Positives = 35/61 (57%)
 Frame = +1

Query: 1    IWKAKLHPSTQAIGWKIFQGIRHTDDKLKKRNFKIASRCCMCLQHEETQDHILFRCTFAK 180
            IW+ ++ P      W+   G   T ++L++R F +A+RC +CL  EET DH+L  C   +
Sbjct: 1475 IWRTRVPPKVAFFAWEASWGKVLTQEQLQRRGFSLANRCFLCLSEEETVDHLLLHCVKTR 1534

Query: 181  D 183
            D
Sbjct: 1535 D 1535



 Score = 25.4 bits (54), Expect(2) = 7e-08
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 279  KDIWTAAAIACLVHIWKTRNRVLYDD 356
            K  W  A +     +WK RNR+ + D
Sbjct: 1571 KKAWQMAPLCIFWSVWKERNRLAFGD 1596


>emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]
          Length = 2095

 Score = 55.8 bits (133), Expect(2) = 9e-08
 Identities = 22/56 (39%), Positives = 34/56 (60%)
 Frame = +1

Query: 1    IWKAKLHPSTQAIGWKIFQGIRHTDDKLKKRNFKIASRCCMCLQHEETQDHILFRC 168
            IW+A++ P      W+   G   T ++L++R F +A+RC +CL  EET DH+L  C
Sbjct: 1934 IWRARVPPKVAFFAWEAXWGKVLTQEQLQRRGFSLANRCFLCLSEEETVDHLLLHC 1989



 Score = 25.0 bits (53), Expect(2) = 9e-08
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 279  KDIWTAAAIACLVHIWKTRNRVLYDD 356
            K  W  A +     +WK RNR+ + D
Sbjct: 2030 KKAWQMAPLCIFWTVWKERNRLAFGD 2055


Top