BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040098
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   113   1e-23
dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]        113   1e-23
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]   110   2e-22
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   109   2e-22
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   109   2e-22

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/129 (42%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
 Frame = +3

Query: 3   KIQDFSFLLDKVRGAVSNWQGKLLSQAGKTILVQAVAQAKPIYSMSAFYLPLDITSKMDR 182
           K + FSF+ D+++  ++ W  K LS+ GK +++++VA   P Y MS F LP  ITSK+  
Sbjct: 545 KTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTS 604

Query: 183 ACRNFWW-NNADSNAIHLCTWDKLCMPKAEGGLGFRDSRLFNLALLCKLLWKAV-SEKSL 356
           A   FWW +N DS  +H   WDKLC  K++GGLGFR+   FN ALL K LW+ + +  SL
Sbjct: 605 AVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSL 664

Query: 357 WSDLMLAKY 383
           ++ +   +Y
Sbjct: 665 FAKVFKGRY 673


>dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]
          Length = 170

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/129 (42%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
 Frame = +3

Query: 3   KIQDFSFLLDKVRGAVSNWQGKLLSQAGKTILVQAVAQAKPIYSMSAFYLPLDITSKMDR 182
           K + FSF+ D+++  ++ W  K LS+ GK ++++ VA A P Y MS F LP  ITSK+  
Sbjct: 15  KTKMFSFVRDRLQNRINGWSAKFLSKGGKEVMIKLVATALPTYVMSCFTLPKTITSKLTS 74

Query: 183 ACRNFWW-NNADSNAIHLCTWDKLCMPKAEGGLGFRDSRLFNLALLCKLLWKAVS-EKSL 356
           A   FWW +N +S  +H   WDK+C  K+EGGLGFR    FN ALL K LW+ ++   SL
Sbjct: 75  AIPKFWWSSNGESRGMHWMAWDKVCYSKSEGGLGFRSVDNFNSALLAKQLWRLITVPNSL 134

Query: 357 WSDLMLAKY 383
           ++ +   +Y
Sbjct: 135 FARVFKGRY 143


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
 Frame = +3

Query: 15  FSFLLDKVRGAVSNWQGKLLSQAGKTILVQAVAQAKPIYSMSAFYLPLDITSKMDRACRN 194
           F FL D++   +  WQ KLLSQAGK IL++ V QA P Y MS F LP+ ++ ++ +   +
Sbjct: 166 FGFLRDRLWRRLQGWQSKLLSQAGKKILIKVVGQAIPSYCMSTFLLPISLSEELQKMMNS 225

Query: 195 FWW--NNADSNAIHLCTWDKLCMPKAEGGLGFRDSRLFNLALLCKLLWKAVSE-KSLWSD 365
           FWW   +     I+  +WDKLC+ K EGGLGFR+ R FNLA+L K  W  +++  SL + 
Sbjct: 226 FWWGPKSDGGRRINWLSWDKLCLRKEEGGLGFRNLRDFNLAMLGKQGWNLITKPDSLIAR 285

Query: 366 LMLAKY 383
           L+ A+Y
Sbjct: 286 LLKARY 291


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/125 (42%), Positives = 82/125 (65%), Gaps = 2/125 (1%)
 Frame = +3

Query: 15   FSFLLDKVRGAVSNWQGKLLSQAGKTILVQAVAQAKPIYSMSAFYLPLDITSKMDRACRN 194
            FS+L +++   +  W+ KLLS+AGK IL++AVAQA P ++M  F L  D+  ++ +    
Sbjct: 1021 FSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAK 1080

Query: 195  FWWNNAD-SNAIHLCTWDKLCMPKAEGGLGFRDSRLFNLALLCKLLWKAVSE-KSLWSDL 368
            +WW+N +  N +H  +W+KL +PK  GGLGFRD  +FNLA+L K  W+ + +  SL S +
Sbjct: 1081 YWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRV 1140

Query: 369  MLAKY 383
            + AKY
Sbjct: 1141 LRAKY 1145


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/125 (42%), Positives = 82/125 (65%), Gaps = 2/125 (1%)
 Frame = +3

Query: 15   FSFLLDKVRGAVSNWQGKLLSQAGKTILVQAVAQAKPIYSMSAFYLPLDITSKMDRACRN 194
            FS+L +++   +  W+ KLLS+AGK IL++AVAQA P ++M  F L  D+  ++ +    
Sbjct: 994  FSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAK 1053

Query: 195  FWWNNAD-SNAIHLCTWDKLCMPKAEGGLGFRDSRLFNLALLCKLLWKAVSE-KSLWSDL 368
            +WW+N +  N +H  +W+KL +PK  GGLGFRD  +FNLA+L K  W+ + +  SL S +
Sbjct: 1054 YWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRV 1113

Query: 369  MLAKY 383
            + AKY
Sbjct: 1114 LRAKY 1118