BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040093
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522208.1| hypothetical protein RCOM_1732210 [Ricinus c...    77   1e-12
gb|ABD33309.1| Ribonuclease H [Medicago truncatula]                    72   5e-11
ref|XP_003625075.1| TMV resistance protein N [Medicago truncatul...    72   5e-11
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    70   2e-10
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002522208.1| hypothetical protein RCOM_1732210 [Ricinus communis]
           gi|223538579|gb|EEF40183.1| hypothetical protein
           RCOM_1732210 [Ricinus communis]
          Length = 95

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/87 (43%), Positives = 50/87 (57%)
 Frame = -1

Query: 264 PRTFECYWVAPPSNMIKVNADGCSRDNPGNSGWGTLLRDSNGNVIGAYIGGLGIATNFIA 85
           P+ F   W  PP + IK+N++G +R  PG +G G L R+  G V G +I  L     F+A
Sbjct: 2   PKIFTIKWHPPPPSWIKLNSNGATRGAPGTTGVGGLFRNCRGVVKGCFIVPLSTTYAFVA 61

Query: 84  ESFAIVEGISKAVELGWKLIWVESDST 4
           E  A + GI KA   GW  IW+ESDST
Sbjct: 62  EIKAAIYGIDKAYNFGWNKIWLESDST 88


>gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = -1

Query: 237  APPSNMIKVNADGCSRDNPGNSGWGTLLRDSNGNVIGAYIGGLGIATNFIAESFAIVEGI 58
            +P    IK+N DGC  DNP ++G+G L RD +GN +G + G LG  T   AE +AI +G+
Sbjct: 1177 SPTRRFIKLNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGL 1236

Query: 57   SKAVELGWKLIWVESD 10
              A + G++ I VE+D
Sbjct: 1237 ITAWDFGYRNILVETD 1252


>ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
            gi|355500090|gb|AES81293.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1579

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = -1

Query: 237  APPSNMIKVNADGCSRDNPGNSGWGTLLRDSNGNVIGAYIGGLGIATNFIAESFAIVEGI 58
            +P    IK+N DGC  DNP ++G+G L RD +GN +G + G LG  T   AE +AI +G+
Sbjct: 1360 SPTRRFIKLNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGL 1419

Query: 57   SKAVELGWKLIWVESD 10
              A + G++ I VE+D
Sbjct: 1420 ITAWDFGYRNILVETD 1435


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/105 (36%), Positives = 59/105 (56%)
 Frame = -1

Query: 315  DLAILKVWKLPPKLRKAPRTFECYWVAPPSNMIKVNADGCSRDNPGNSGWGTLLRDSNGN 136
            D AIL+ + + P+ RK        W  P   ++KVN DG      G +  G L RDS+G+
Sbjct: 991  DSAILEEFSVSPRHRKYKDIILVLWKNPSPPLLKVNTDGSVVG--GLAACGGLFRDSSGS 1048

Query: 135  VIGAYIGGLGIATNFIAESFAIVEGISKAVELGWKLIWVESDSTA 1
             +GA+   +G+A+ F AE+ A +  +  A   GW+ +W+ESDST+
Sbjct: 1049 FLGAFSCNIGLASVFHAETLAFILALEHAAHHGWRNLWLESDSTS 1093


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = -1

Query: 243 WVAPPSNMIKVNADGCSRDNPGNSGWGTLLRDSNGNVIGAYIGGLGIATNFIAESFAIVE 64
           W  P    IK+N DGCS+ NPG +G G ++RD  G  IG +   +GI ++  AE +A+  
Sbjct: 76  WKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYV 135

Query: 63  GISKAVELGWKLIWVESDS 7
           G+  A + G++ + +ESDS
Sbjct: 136 GLQLAWDRGFRKVDLESDS 154