BLASTX nr result

ID: Coptis23_contig00040088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040088
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28245.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002531956.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago t...    91   1e-16
ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782...    87   1e-15

>emb|CBI28245.3| unnamed protein product [Vitis vinifera]
          Length = 860

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/86 (61%), Positives = 64/86 (74%)
 Frame = +1

Query: 1   RSSCLKTWCYLLHKLDLSVNCPSVRKSVLEPILEVVFQVGTDDKSMWLWNYCLDLLDDLV 180
           RSSCL TWCYLLHKLD+SVN P V ++VL PILE VFQ G D +S+WLWN C+DL DD V
Sbjct: 363 RSSCLNTWCYLLHKLDISVNDPLVVETVLAPILEAVFQTGPDSRSIWLWNLCVDLFDDFV 422

Query: 181 SACNRGRDYNSSQQVSRNSSTKTSSL 258
            A +RG D + + QVS + S +TS L
Sbjct: 423 LAKSRGVDCDLNHQVS-DLSARTSIL 447


>ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|222866634|gb|EEF03765.1|
           predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/79 (60%), Positives = 58/79 (73%)
 Frame = +1

Query: 4   SSCLKTWCYLLHKLDLSVNCPSVRKSVLEPILEVVFQVGTDDKSMWLWNYCLDLLDDLVS 183
           SSCLKTWCYLLHKLD+SVN P V + VL+PI   VF+ G D K+ WLWN CLDLLDD + 
Sbjct: 359 SSCLKTWCYLLHKLDISVNHPWVIELVLDPIFGAVFRFGPDVKTFWLWNLCLDLLDDFIL 418

Query: 184 ACNRGRDYNSSQQVSRNSS 240
           A  R  D+ +S QVS +S+
Sbjct: 419 AKCRNLDHETSSQVSHHST 437


>ref|XP_002531956.1| conserved hypothetical protein [Ricinus communis]
           gi|223528402|gb|EEF30438.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1038

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/86 (51%), Positives = 59/86 (68%)
 Frame = +1

Query: 7   SCLKTWCYLLHKLDLSVNCPSVRKSVLEPILEVVFQVGTDDKSMWLWNYCLDLLDDLVSA 186
           SCL TWCYL+HKL++S+N PSV + VL P+ + VF++  D K+ WLW+ CLDLLDD + A
Sbjct: 268 SCLNTWCYLIHKLNISINHPSVIELVLTPVFKAVFKMDPDTKTAWLWSLCLDLLDDFIIA 327

Query: 187 CNRGRDYNSSQQVSRNSSTKTSSLRP 264
             +  D   S +VS +SS  TS L P
Sbjct: 328 KCQKLDNELSSKVSHHSSVGTSMLGP 353


>ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago truncatula]
           gi|355510459|gb|AES91601.1| Telomere-associated protein
           RIF1 [Medicago truncatula]
          Length = 1121

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/87 (55%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = +1

Query: 4   SSCLKTWCYLLHKLDLSVNCPSVRKSVLEPILEVVFQVGTDDKSMWLWNYCLDLLDDLVS 183
           SSCL TWCYLLHKLD SVN  S+ K VLEPIL+V+FQ G D K++WLWN  LDLL D VS
Sbjct: 362 SSCLNTWCYLLHKLDTSVNESSLIKMVLEPILKVIFQNGPDSKTIWLWNLGLDLLSDSVS 421

Query: 184 -ACNRGRDYNSSQQVSRNSSTKTSSLR 261
             C       +    S  SS K   +R
Sbjct: 422 QKCRDAHCIETGHSSSDKSSWKQHPIR 448


>ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782723 [Glycine max]
          Length = 1894

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/85 (54%), Positives = 54/85 (63%)
 Frame = +1

Query: 4   SSCLKTWCYLLHKLDLSVNCPSVRKSVLEPILEVVFQVGTDDKSMWLWNYCLDLLDDLVS 183
           SSCL TWCYLLHKLD+S+N PSV K VLEPIL+ +FQ G +  S+ LWN  LDLL D +S
Sbjct: 362 SSCLNTWCYLLHKLDISINEPSVIKMVLEPILKAIFQNGPNSNSICLWNLGLDLLSDSIS 421

Query: 184 ACNRGRDYNSSQQVSRNSSTKTSSL 258
                  Y S+  VS   S    SL
Sbjct: 422 QKCMDVFYQSTGPVSHKISENGPSL 446


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