BLASTX nr result
ID: Coptis23_contig00040088
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00040088 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28245.3| unnamed protein product [Vitis vinifera] 107 1e-21 ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|2... 102 4e-20 ref|XP_002531956.1| conserved hypothetical protein [Ricinus comm... 95 7e-18 ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago t... 91 1e-16 ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782... 87 1e-15 >emb|CBI28245.3| unnamed protein product [Vitis vinifera] Length = 860 Score = 107 bits (266), Expect = 1e-21 Identities = 53/86 (61%), Positives = 64/86 (74%) Frame = +1 Query: 1 RSSCLKTWCYLLHKLDLSVNCPSVRKSVLEPILEVVFQVGTDDKSMWLWNYCLDLLDDLV 180 RSSCL TWCYLLHKLD+SVN P V ++VL PILE VFQ G D +S+WLWN C+DL DD V Sbjct: 363 RSSCLNTWCYLLHKLDISVNDPLVVETVLAPILEAVFQTGPDSRSIWLWNLCVDLFDDFV 422 Query: 181 SACNRGRDYNSSQQVSRNSSTKTSSL 258 A +RG D + + QVS + S +TS L Sbjct: 423 LAKSRGVDCDLNHQVS-DLSARTSIL 447 >ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|222866634|gb|EEF03765.1| predicted protein [Populus trichocarpa] Length = 1116 Score = 102 bits (253), Expect = 4e-20 Identities = 48/79 (60%), Positives = 58/79 (73%) Frame = +1 Query: 4 SSCLKTWCYLLHKLDLSVNCPSVRKSVLEPILEVVFQVGTDDKSMWLWNYCLDLLDDLVS 183 SSCLKTWCYLLHKLD+SVN P V + VL+PI VF+ G D K+ WLWN CLDLLDD + Sbjct: 359 SSCLKTWCYLLHKLDISVNHPWVIELVLDPIFGAVFRFGPDVKTFWLWNLCLDLLDDFIL 418 Query: 184 ACNRGRDYNSSQQVSRNSS 240 A R D+ +S QVS +S+ Sbjct: 419 AKCRNLDHETSSQVSHHST 437 >ref|XP_002531956.1| conserved hypothetical protein [Ricinus communis] gi|223528402|gb|EEF30438.1| conserved hypothetical protein [Ricinus communis] Length = 1038 Score = 94.7 bits (234), Expect = 7e-18 Identities = 44/86 (51%), Positives = 59/86 (68%) Frame = +1 Query: 7 SCLKTWCYLLHKLDLSVNCPSVRKSVLEPILEVVFQVGTDDKSMWLWNYCLDLLDDLVSA 186 SCL TWCYL+HKL++S+N PSV + VL P+ + VF++ D K+ WLW+ CLDLLDD + A Sbjct: 268 SCLNTWCYLIHKLNISINHPSVIELVLTPVFKAVFKMDPDTKTAWLWSLCLDLLDDFIIA 327 Query: 187 CNRGRDYNSSQQVSRNSSTKTSSLRP 264 + D S +VS +SS TS L P Sbjct: 328 KCQKLDNELSSKVSHHSSVGTSMLGP 353 >ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago truncatula] gi|355510459|gb|AES91601.1| Telomere-associated protein RIF1 [Medicago truncatula] Length = 1121 Score = 90.9 bits (224), Expect = 1e-16 Identities = 48/87 (55%), Positives = 55/87 (63%), Gaps = 1/87 (1%) Frame = +1 Query: 4 SSCLKTWCYLLHKLDLSVNCPSVRKSVLEPILEVVFQVGTDDKSMWLWNYCLDLLDDLVS 183 SSCL TWCYLLHKLD SVN S+ K VLEPIL+V+FQ G D K++WLWN LDLL D VS Sbjct: 362 SSCLNTWCYLLHKLDTSVNESSLIKMVLEPILKVIFQNGPDSKTIWLWNLGLDLLSDSVS 421 Query: 184 -ACNRGRDYNSSQQVSRNSSTKTSSLR 261 C + S SS K +R Sbjct: 422 QKCRDAHCIETGHSSSDKSSWKQHPIR 448 >ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782723 [Glycine max] Length = 1894 Score = 87.0 bits (214), Expect = 1e-15 Identities = 46/85 (54%), Positives = 54/85 (63%) Frame = +1 Query: 4 SSCLKTWCYLLHKLDLSVNCPSVRKSVLEPILEVVFQVGTDDKSMWLWNYCLDLLDDLVS 183 SSCL TWCYLLHKLD+S+N PSV K VLEPIL+ +FQ G + S+ LWN LDLL D +S Sbjct: 362 SSCLNTWCYLLHKLDISINEPSVIKMVLEPILKAIFQNGPNSNSICLWNLGLDLLSDSIS 421 Query: 184 ACNRGRDYNSSQQVSRNSSTKTSSL 258 Y S+ VS S SL Sbjct: 422 QKCMDVFYQSTGPVSHKISENGPSL 446