BLASTX nr result

ID: Coptis23_contig00040087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040087
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525677.1| conserved hypothetical protein [Ricinus comm...   150   8e-35
ref|XP_002882301.1| C2 domain-containing protein [Arabidopsis ly...   148   5e-34
ref|XP_002276331.1| PREDICTED: uncharacterized protein LOC100253...   147   9e-34
emb|CAN63720.1| hypothetical protein VITISV_009775 [Vitis vinifera]   147   9e-34
ref|XP_002319731.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33

>ref|XP_002525677.1| conserved hypothetical protein [Ricinus communis]
           gi|223534977|gb|EEF36660.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1000

 Score =  150 bits (380), Expect = 8e-35
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = +2

Query: 14  SSSVNPCWNEDLVFIAAEPFEPFLVVSVEDVSSGQSVGCAKVHVPSLDRRTDDRADPRSR 193
           SSS NP WNEDLVF+AAEPFEPFLVV+VED S+GQSVG AK+ + S++RRTDDR +P+SR
Sbjct: 477 SSSANPTWNEDLVFVAAEPFEPFLVVTVEDASNGQSVGNAKIQMASIERRTDDRTEPKSR 536

Query: 194 WFNLTGDENRPYAGRIHVRCCLEGGYH 274
           WFNL GDE+RPY GRIHVR CLEGGYH
Sbjct: 537 WFNLVGDESRPYTGRIHVRVCLEGGYH 563


>ref|XP_002882301.1| C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328141|gb|EFH58560.1| C2 domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1017

 Score =  148 bits (373), Expect = 5e-34
 Identities = 62/91 (68%), Positives = 80/91 (87%)
 Frame = +2

Query: 2   SISASSSVNPCWNEDLVFIAAEPFEPFLVVSVEDVSSGQSVGCAKVHVPSLDRRTDDRAD 181
           S S+S S NP WNEDLVF+A+EPFEPFL+V+VED+++GQS+G  K+H+ S++RR DDR +
Sbjct: 489 STSSSGSGNPTWNEDLVFVASEPFEPFLIVTVEDITNGQSIGQTKIHMGSVERRNDDRTE 548

Query: 182 PRSRWFNLTGDENRPYAGRIHVRCCLEGGYH 274
           P+SRWFNL GDEN+PY+GRIHV+ CLEGGYH
Sbjct: 549 PKSRWFNLAGDENKPYSGRIHVKVCLEGGYH 579


>ref|XP_002276331.1| PREDICTED: uncharacterized protein LOC100253604 [Vitis vinifera]
          Length = 996

 Score =  147 bits (371), Expect = 9e-34
 Identities = 67/85 (78%), Positives = 74/85 (87%)
 Frame = +2

Query: 20  SVNPCWNEDLVFIAAEPFEPFLVVSVEDVSSGQSVGCAKVHVPSLDRRTDDRADPRSRWF 199
           S NP WNEDL+F+AAEPFE FLV++VEDV+SGQ VG AKVHVPSLDRRTDD  + +SRWF
Sbjct: 475 SSNPTWNEDLLFVAAEPFEQFLVMTVEDVTSGQPVGHAKVHVPSLDRRTDDTTESKSRWF 534

Query: 200 NLTGDENRPYAGRIHVRCCLEGGYH 274
           NL GDE RPYAGRIHVR CLEGGYH
Sbjct: 535 NLVGDEKRPYAGRIHVRACLEGGYH 559


>emb|CAN63720.1| hypothetical protein VITISV_009775 [Vitis vinifera]
          Length = 977

 Score =  147 bits (371), Expect = 9e-34
 Identities = 67/85 (78%), Positives = 74/85 (87%)
 Frame = +2

Query: 20  SVNPCWNEDLVFIAAEPFEPFLVVSVEDVSSGQSVGCAKVHVPSLDRRTDDRADPRSRWF 199
           S NP WNEDL+F+AAEPFE FLV++VEDV+SGQ VG AKVHVPSLDRRTDD  + +SRWF
Sbjct: 456 SSNPTWNEDLLFVAAEPFEQFLVMTVEDVTSGQPVGHAKVHVPSLDRRTDDXTESKSRWF 515

Query: 200 NLTGDENRPYAGRIHVRCCLEGGYH 274
           NL GDE RPYAGRIHVR CLEGGYH
Sbjct: 516 NLVGDEKRPYAGRIHVRACLEGGYH 540


>ref|XP_002319731.1| predicted protein [Populus trichocarpa] gi|222858107|gb|EEE95654.1|
           predicted protein [Populus trichocarpa]
          Length = 993

 Score =  147 bits (370), Expect = 1e-33
 Identities = 64/89 (71%), Positives = 78/89 (87%)
 Frame = +2

Query: 8   SASSSVNPCWNEDLVFIAAEPFEPFLVVSVEDVSSGQSVGCAKVHVPSLDRRTDDRADPR 187
           +++SS NP WNEDLVF+AAEPFEPFL V+VEDV++GQSVG AK+HV S++RRTDDR + +
Sbjct: 467 TSASSANPTWNEDLVFVAAEPFEPFLTVTVEDVTNGQSVGHAKIHVASIERRTDDRTELK 526

Query: 188 SRWFNLTGDENRPYAGRIHVRCCLEGGYH 274
           SRWFNL GD+ +PY GRIHVR CLEGGYH
Sbjct: 527 SRWFNLVGDDTKPYTGRIHVRVCLEGGYH 555


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