BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040073
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002511505.1| pentatricopeptide repeat-containing protein,...    99   5e-19
ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19
ref|XP_002887557.1| pentatricopeptide repeat-containing protein ...    94   9e-18

>ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 882

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/52 (84%), Positives = 50/52 (96%)
 Frame = -2

Query: 300 RVTGSSLVRQSVKELLHIFEFPFFTENGNSGCFVGCGESLNRWLLHSYVERM 145
           RVTGSSLVRQ+V+ELLH+F FPFFTENGNSGCFVGCGE L++WL+HSYVERM
Sbjct: 828 RVTGSSLVRQAVQELLHVFSFPFFTENGNSGCFVGCGEPLSQWLVHSYVERM 879


>ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|222868533|gb|EEF05664.1|
           predicted protein [Populus trichocarpa]
          Length = 834

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = -2

Query: 300 RVTGSSLVRQSVKELLHIFEFPFFTENGNSGCFVGCGESLNRWLLHSYVERM 145
           RVTGSSLVRQ+V+ELLHIF FPFFTENGN+GCFVGCGE L+RWLL SYVERM
Sbjct: 780 RVTGSSLVRQAVQELLHIFSFPFFTENGNTGCFVGCGEPLSRWLLQSYVERM 831


>ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550620|gb|EEF52107.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 876

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -2

Query: 300 RVTGSSLVRQSVKELLHIFEFPFFTENGNSGCFVGCGESLNRWLLHSYVERM 145
           RVTGSS+VRQ+V+ELLHIF FPFFTENGNSGCFVGCGE LNRWLL  YV+RM
Sbjct: 822 RVTGSSMVRQAVQELLHIFSFPFFTENGNSGCFVGCGEPLNRWLLQPYVDRM 873


>ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 879

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 43/52 (82%), Positives = 49/52 (94%)
 Frame = -2

Query: 300 RVTGSSLVRQSVKELLHIFEFPFFTENGNSGCFVGCGESLNRWLLHSYVERM 145
           RVTGSSLVRQ+V+ELLH+F FPFFTEN NSGCFVGCGE L++WL+HSYVERM
Sbjct: 825 RVTGSSLVRQAVQELLHVFSFPFFTENSNSGCFVGCGEPLSQWLVHSYVERM 876


>ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297333398|gb|EFH63816.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 845

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -2

Query: 300 RVTGSSLVRQSVKELLHIFEFPFFTENGNSGCFVGCGESLNRWLLHSYVERM 145
           RVTG+S+VRQ+V+ELL+IF FPFFTENGNSGCFVGCGE L +WLL SYVERM
Sbjct: 791 RVTGTSMVRQAVEELLNIFNFPFFTENGNSGCFVGCGEPLKKWLLESYVERM 842