BLASTX nr result

ID: Coptis23_contig00040062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040062
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40093.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002266397.1| PREDICTED: uncharacterized protein LOC100264...   148   5e-34
emb|CAN72785.1| hypothetical protein VITISV_039508 [Vitis vinifera]   148   5e-34
ref|XP_003520089.1| PREDICTED: uncharacterized protein LOC100794...   141   6e-32
ref|XP_002336049.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>emb|CBI40093.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  148 bits (373), Expect = 5e-34
 Identities = 65/88 (73%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
 Frame = +3

Query: 54  GLVLDLGTKGCWDSFEIGSPVIKRFISDDEERWYMWYHG--NSDGGSDVIGLALSSNGAH 227
           GLV DLG    WDS +IGSPV+KRF+SDDEERWYMWYHG  N +  SD IGLA+SSNG H
Sbjct: 120 GLVFDLGPSNSWDSAQIGSPVVKRFLSDDEERWYMWYHGASNENSASDSIGLAVSSNGVH 179

Query: 228 WEKGAGPVRSSADVGLVMNCSKDWWAFD 311
           WE+G GPVRS  DVGLVMNC KDWWAFD
Sbjct: 180 WERGGGPVRSGGDVGLVMNCGKDWWAFD 207


>ref|XP_002266397.1| PREDICTED: uncharacterized protein LOC100264211 [Vitis vinifera]
          Length = 491

 Score =  148 bits (373), Expect = 5e-34
 Identities = 65/88 (73%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
 Frame = +3

Query: 54  GLVLDLGTKGCWDSFEIGSPVIKRFISDDEERWYMWYHG--NSDGGSDVIGLALSSNGAH 227
           GLV DLG    WDS +IGSPV+KRF+SDDEERWYMWYHG  N +  SD IGLA+SSNG H
Sbjct: 120 GLVFDLGPSNSWDSAQIGSPVVKRFLSDDEERWYMWYHGASNENSASDSIGLAVSSNGVH 179

Query: 228 WEKGAGPVRSSADVGLVMNCSKDWWAFD 311
           WE+G GPVRS  DVGLVMNC KDWWAFD
Sbjct: 180 WERGGGPVRSGGDVGLVMNCGKDWWAFD 207


>emb|CAN72785.1| hypothetical protein VITISV_039508 [Vitis vinifera]
          Length = 531

 Score =  148 bits (373), Expect = 5e-34
 Identities = 65/88 (73%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
 Frame = +3

Query: 54  GLVLDLGTKGCWDSFEIGSPVIKRFISDDEERWYMWYHG--NSDGGSDVIGLALSSNGAH 227
           GLV DLG    WDS +IGSPV+KRF+SDDEERWYMWYHG  N +  SD IGLA+SSNG H
Sbjct: 120 GLVFDLGPSNSWDSAQIGSPVVKRFLSDDEERWYMWYHGASNENSASDSIGLAVSSNGVH 179

Query: 228 WEKGAGPVRSSADVGLVMNCSKDWWAFD 311
           WE+G GPVRS  DVGLVMNC KDWWAFD
Sbjct: 180 WERGGGPVRSGGDVGLVMNCGKDWWAFD 207


>ref|XP_003520089.1| PREDICTED: uncharacterized protein LOC100794036 [Glycine max]
          Length = 497

 Score =  141 bits (355), Expect = 6e-32
 Identities = 60/88 (68%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
 Frame = +3

Query: 54  GLVLDLGTKGCWDSFEIGSPVIKRFISDDEERWYMWYHGNSDG--GSDVIGLALSSNGAH 227
           GLVLDLG    WDS +IGSPV+KRF+SD+EERWYMWYHG + G   SD+IGLA+S NG H
Sbjct: 125 GLVLDLGPSNSWDSADIGSPVVKRFLSDEEERWYMWYHGRAKGYPSSDLIGLAVSKNGVH 184

Query: 228 WEKGAGPVRSSADVGLVMNCSKDWWAFD 311
           WE+G GP RSS+DVG V++C KDWW FD
Sbjct: 185 WERGGGPARSSSDVGFVISCGKDWWGFD 212


>ref|XP_002336049.1| predicted protein [Populus trichocarpa] gi|222869554|gb|EEF06685.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  139 bits (351), Expect = 2e-31
 Identities = 62/89 (69%), Positives = 69/89 (77%), Gaps = 3/89 (3%)
 Frame = +3

Query: 54  GLVLDLGTKGCWDSFEIGSPVIKRFISDDEERWYMWYHGNSD---GGSDVIGLALSSNGA 224
           GLV DLG    WD  EIGSPV+KRF+SD+EERWYMWYHGNS    G +D IGLA+SSNG 
Sbjct: 7   GLVFDLGPLNSWDGKEIGSPVVKRFLSDEEERWYMWYHGNSSQNSGSADSIGLAVSSNGI 66

Query: 225 HWEKGAGPVRSSADVGLVMNCSKDWWAFD 311
           HWE+G GPV SS DVG VM C +DWWAFD
Sbjct: 67  HWERGVGPVSSSGDVGSVMKCGQDWWAFD 95


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