BLASTX nr result

ID: Coptis23_contig00040059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040059
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273046.2| PREDICTED: AP2-like ethylene-responsive tran...   114   1e-23
emb|CBI36586.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002528384.1| conserved hypothetical protein [Ricinus comm...    99   5e-19
ref|XP_002272159.1| PREDICTED: AP2-like ethylene-responsive tran...    97   1e-18
ref|XP_002325111.1| AP2 domain-containing transcription factor [...    96   3e-18

>ref|XP_002273046.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060 [Vitis vinifera]
          Length = 347

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/86 (68%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
 Frame = +3

Query: 87  FLFLIATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNPTDPITNDSSP--DSHL 260
           +L   ATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWL+PN  +P    ++P  DS+L
Sbjct: 171 YLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNQNNPCEQPNNPNLDSNL 230

Query: 261 NPNPNHEFEIGFLNH-QTSITSKVLE 335
            PNPNH+F I FLNH QTS T+   E
Sbjct: 231 TPNPNHDFGISFLNHPQTSGTAACSE 256


>emb|CBI36586.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/82 (70%), Positives = 66/82 (80%), Gaps = 3/82 (3%)
 Frame = +3

Query: 87  FLFLIATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNPTDPITNDSSP--DSHL 260
           +L   ATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWL+PN  +P    ++P  DS+L
Sbjct: 174 YLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNQNNPCEQPNNPNLDSNL 233

Query: 261 NPNPNHEFEIGFLNH-QTSITS 323
            PNPNH+F I FLNH QTS T+
Sbjct: 234 TPNPNHDFGISFLNHPQTSGTA 255


>ref|XP_002528384.1| conserved hypothetical protein [Ricinus communis]
           gi|223532172|gb|EEF33977.1| conserved hypothetical
           protein [Ricinus communis] gi|441477733|dbj|BAM75179.1|
           AP2-type transcription factor [Ricinus communis]
          Length = 327

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/69 (72%), Positives = 55/69 (79%)
 Frame = +3

Query: 87  FLFLIATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNPTDPITNDSSPDSHLNP 266
           +L   ATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWL+PNP D I N +  D H +P
Sbjct: 136 YLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNPNDNIKNFN--DQHHHP 193

Query: 267 NPNHEFEIG 293
           NPN +  IG
Sbjct: 194 NPNPKPNIG 202


>ref|XP_002272159.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060-like [Vitis vinifera]
          Length = 361

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 5/79 (6%)
 Frame = +3

Query: 87  FLFLIATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNPTDPITNDSSPDSHLNP 266
           +L   ATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPN +D + +  +P+   +P
Sbjct: 173 YLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNQSDSVGSMQNPNGQSSP 232

Query: 267 NPN-----HEFEIGFLNHQ 308
            PN     HE  + FL  Q
Sbjct: 233 APNPNPSDHELGLSFLQQQ 251


>ref|XP_002325111.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222866545|gb|EEF03676.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 353

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 54/98 (55%), Positives = 62/98 (63%), Gaps = 10/98 (10%)
 Frame = +3

Query: 87  FLFLIATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNPTDPITNDS-------- 242
           +L   ATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWL+PN  +   N+         
Sbjct: 170 YLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNQNNTDNNNGLDLPNPII 229

Query: 243 SPDSHLNPNPNHEFEIGFL--NHQTSITSKVLEGKPRP 350
             D+  +PNPN E    FL  N QT   S+    +PRP
Sbjct: 230 GTDNSTHPNPNQELGTTFLQINQQTYQPSETTLTQPRP 267


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