BLASTX nr result

ID: Coptis23_contig00040054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040054
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   193   1e-47
emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]   193   1e-47
ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   180   1e-43
ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana] ...   169   2e-40

>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  193 bits (491), Expect = 1e-47
 Identities = 97/167 (58%), Positives = 111/167 (66%), Gaps = 4/167 (2%)
 Frame = +2

Query: 2   NNKPLFGGWVLAAKDNQNESSNGTLKMPVDYTLVWSSESMNVTNDSNGYIWLPSPPDGYS 181
           N KPLFG WVLA KDN N    G LK P+DYTLVWSSES+ +  D NGY+WLP+PPDGY 
Sbjct: 98  NKKPLFG-WVLAGKDNTNNPLGGALKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYK 156

Query: 182 AVGLVITNSTNKPPLEKVRCVRSDLLESGEQDEWIW----EEGTGQIIVYGLRPTTRGTN 349
           AVG VITN   KP L+K+RCVRSDL +  E D WIW            VY L+P+ RG  
Sbjct: 157 AVGHVITNLPEKPSLDKIRCVRSDLTDLCEADTWIWGLDKVANANGFNVYDLQPSDRGAQ 216

Query: 350 ALGVQVGTFVVQVAGADTPLPLFCLKNVDFNLAYMPNATQIEALVQA 490
           AL V VGTFV Q  GA + L L CLKN+  NL  MPN  Q++ALVQA
Sbjct: 217 ALAVSVGTFVAQNGGAASSLSLACLKNISSNLYAMPNLAQVDALVQA 263


>emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]
          Length = 913

 Score =  193 bits (491), Expect = 1e-47
 Identities = 97/167 (58%), Positives = 111/167 (66%), Gaps = 4/167 (2%)
 Frame = +2

Query: 2   NNKPLFGGWVLAAKDNQNESSNGTLKMPVDYTLVWSSESMNVTNDSNGYIWLPSPPDGYS 181
           N KPLFG WVLA KDN N    G LK P+DYTLVWSSES+ +  D NGY+WLP+PPDGY 
Sbjct: 67  NKKPLFG-WVLAGKDNTNNPLGGALKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYK 125

Query: 182 AVGLVITNSTNKPPLEKVRCVRSDLLESGEQDEWIW----EEGTGQIIVYGLRPTTRGTN 349
           AVG VITN   KP L+K+RCVRSDL +  E D WIW            VY L+P+ RG  
Sbjct: 126 AVGHVITNLPEKPSLDKIRCVRSDLTDLCEADTWIWGLDKVANANGFNVYDLQPSDRGAQ 185

Query: 350 ALGVQVGTFVVQVAGADTPLPLFCLKNVDFNLAYMPNATQIEALVQA 490
           AL V VGTFV Q  GA + L L CLKN+  NL  MPN  Q++ALVQA
Sbjct: 186 ALAVSVGTFVAQNGGAASSLSLACLKNISSNLYAMPNLAQVDALVQA 232


>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
           gi|223537142|gb|EEF38775.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 551

 Score =  180 bits (456), Expect = 1e-43
 Identities = 90/167 (53%), Positives = 115/167 (68%), Gaps = 4/167 (2%)
 Frame = +2

Query: 2   NNKPLFGGWVLAAKDNQNESSNGTLKMPVDYTLVWSSESMNVTNDSNGYIWLPSPPDGYS 181
           N++PL+G WVLA KD+    + G L+ P+DYTLVWSSES+ +  DS GYIWLP+ PDGY 
Sbjct: 94  NSRPLYG-WVLAGKDD----AGGALEKPIDYTLVWSSESLKIKQDSIGYIWLPTAPDGYR 148

Query: 182 AVGLVITNSTNKPPLEKVRCVRSDLLESGEQDEWIW----EEGTGQIIVYGLRPTTRGTN 349
           AVGLV+T+S  KP L+K+RCVRSDL +  E+D W+W    +       V+ LRP+ RGT 
Sbjct: 149 AVGLVVTSSPEKPSLDKMRCVRSDLTDQCEKDIWVWGPEKQSDPNGFNVFSLRPSNRGTQ 208

Query: 350 ALGVQVGTFVVQVAGADTPLPLFCLKNVDFNLAYMPNATQIEALVQA 490
           A+GV VGTFV Q    + P  L CLKNV  NL+ MPN  QI+A+ QA
Sbjct: 209 AMGVCVGTFVAQNGNDNNPASLVCLKNVSNNLSCMPNENQIQAIFQA 255


>ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  170 bits (431), Expect = 1e-40
 Identities = 89/167 (53%), Positives = 108/167 (64%), Gaps = 4/167 (2%)
 Frame = +2

Query: 2   NNKPLFGGWVLAAKDNQNESSNGTLKMPVDYTLVWSSESMNVTNDSNGYIWLPSPPDGYS 181
           NN+ L+G WVLA +D     +   LK P+DYTLVWSSES+ +  D  GYIWLP+PPDGY 
Sbjct: 131 NNRSLYG-WVLAGRDE----TGSALKQPIDYTLVWSSESLQIKQDGVGYIWLPTPPDGYK 185

Query: 182 AVGLVITNSTNKPPLEKVRCVRSDLLESGEQDEWIW----EEGTGQIIVYGLRPTTRGTN 349
           A+G V+T S  KPPL K+RCVRSDL E  E D W+W    E       V+ L P+ RGT 
Sbjct: 186 ALGHVVTKSPQKPPLGKIRCVRSDLTEQCEFDSWVWGLGKESDLNGFNVFSLFPSNRGTQ 245

Query: 350 ALGVQVGTFVVQVAGADTPLPLFCLKNVDFNLAYMPNATQIEALVQA 490
           A+GV VGTFV Q      P+ L CLKNV  NL+ MPN  QI+A+ QA
Sbjct: 246 AMGVCVGTFVAQKT-TTAPVSLSCLKNVVSNLSCMPNLDQIKAIFQA 291


>ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15293039|gb|AAK93630.1| unknown protein [Arabidopsis
           thaliana] gi|20197184|gb|AAC16076.2| expressed protein
           [Arabidopsis thaliana] gi|22136978|gb|AAM91718.1|
           unknown protein [Arabidopsis thaliana]
           gi|330255303|gb|AEC10397.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 553

 Score =  169 bits (429), Expect = 2e-40
 Identities = 87/162 (53%), Positives = 107/162 (66%)
 Frame = +2

Query: 2   NNKPLFGGWVLAAKDNQNESSNGTLKMPVDYTLVWSSESMNVTNDSNGYIWLPSPPDGYS 181
           NN+ LFG WVL A+D     S+ TLK PVDYTLV ++ES+ +  D  GY W P PPDGY 
Sbjct: 101 NNRNLFG-WVLTARD----LSSNTLKPPVDYTLVGNTESLKIKQDGTGYFWQPVPPDGYQ 155

Query: 182 AVGLVITNSTNKPPLEKVRCVRSDLLESGEQDEWIWEEGTGQIIVYGLRPTTRGTNALGV 361
           AVGL++TN + KPPL+K+RC+RSDL E  E D WIW  GT  + +  L+PTTRGT A GV
Sbjct: 156 AVGLIVTNYSQKPPLDKLRCIRSDLTEQCEADTWIW--GTNGVNISNLKPTTRGTQATGV 213

Query: 362 QVGTFVVQVAGADTPLPLFCLKNVDFNLAYMPNATQIEALVQ 487
            VGTF  Q   +  P  L CLKN   + + MPN +QIE L Q
Sbjct: 214 YVGTFTWQTQNSSPP-SLSCLKNTKLDFSTMPNGSQIEELFQ 254


Top