BLASTX nr result
ID: Coptis23_contig00040048
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00040048 (349 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio... 61 1e-07 emb|CBI32503.3| unnamed protein product [Vitis vinifera] 61 1e-07 emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera] 61 1e-07 ref|XP_002315168.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 ref|XP_002330307.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Vitis vinifera] Length = 407 Score = 60.8 bits (146), Expect = 1e-07 Identities = 29/75 (38%), Positives = 47/75 (62%) Frame = -3 Query: 260 IPKSFFTKYLPRRLEDFKIQASDGKEWTVGYNLNENGMRMSKGVSAFLSGCNIKLGNICI 81 +P F KYL + K+Q SDGK+W V E+ +++SKG + F+ N++ G++C+ Sbjct: 318 MPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCV 377 Query: 80 FELVNRKEFELKVKI 36 FEL+N ++ LKV I Sbjct: 378 FELINMEDVVLKVSI 392 >emb|CBI32503.3| unnamed protein product [Vitis vinifera] Length = 355 Score = 60.8 bits (146), Expect = 1e-07 Identities = 29/75 (38%), Positives = 47/75 (62%) Frame = -3 Query: 260 IPKSFFTKYLPRRLEDFKIQASDGKEWTVGYNLNENGMRMSKGVSAFLSGCNIKLGNICI 81 +P F KYL + K+Q SDGK+W V E+ +++SKG + F+ N++ G++C+ Sbjct: 266 MPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCV 325 Query: 80 FELVNRKEFELKVKI 36 FEL+N ++ LKV I Sbjct: 326 FELINMEDVVLKVSI 340 >emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera] Length = 563 Score = 60.8 bits (146), Expect = 1e-07 Identities = 29/75 (38%), Positives = 47/75 (62%) Frame = -3 Query: 260 IPKSFFTKYLPRRLEDFKIQASDGKEWTVGYNLNENGMRMSKGVSAFLSGCNIKLGNICI 81 +P F KYL + K+Q SDGK+W V E+ +++SKG + F+ N++ G++C+ Sbjct: 474 MPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCV 533 Query: 80 FELVNRKEFELKVKI 36 FEL+N ++ LKV I Sbjct: 534 FELINMEDVVLKVSI 548 >ref|XP_002315168.1| predicted protein [Populus trichocarpa] gi|222864208|gb|EEF01339.1| predicted protein [Populus trichocarpa] Length = 341 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%) Frame = -3 Query: 260 IPKSFFTKYLPRRLEDFKIQASDGKEWTVGYNLNE-NGMRMSKGVSAFLSGCNIKLGNIC 84 +P F ++L K+Q SDG+EW + N N+ + +SKG + F N+K G++C Sbjct: 255 VPLEFAQRHLSDAPRCIKLQVSDGREWPIQINRNQCRYLSISKGWNEFSQENNLKEGDVC 314 Query: 83 IFELVNRKEFELKVKIVEQ 27 +FEL+N+++F LKV I + Sbjct: 315 VFELINKEKFVLKVAIFHE 333 >ref|XP_002330307.1| predicted protein [Populus trichocarpa] gi|222871342|gb|EEF08473.1| predicted protein [Populus trichocarpa] Length = 407 Score = 57.0 bits (136), Expect = 2e-06 Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%) Frame = -3 Query: 272 CAQPIPKSFFTKYLPRRLEDFKIQASDGKEWTVGYNLNENG-MRMSKGVSAFLSGCNIKL 96 C +P F ++L E K+Q SDG++W + N + M +S+G + F N+K Sbjct: 317 CFVAVPAEFSKRHLSGVSEHIKLQVSDGRQWPLRLNKTQRARMIISRGWNEFKRENNLKE 376 Query: 95 GNICIFELVNRKEFELKVKI 36 G++C+FEL+ K+F L+V + Sbjct: 377 GDVCVFELIKNKKFSLQVSM 396