BLASTX nr result

ID: Coptis23_contig00040045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040045
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49
ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246...   197   1e-48
emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]   197   1e-48
ref|XP_002533623.1| conserved hypothetical protein [Ricinus comm...   196   2e-48
emb|CBI37224.3| unnamed protein product [Vitis vinifera]              183   1e-44

>ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|222843560|gb|EEE81107.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score =  198 bits (504), Expect = 3e-49
 Identities = 97/116 (83%), Positives = 105/116 (90%)
 Frame = -2

Query: 409  LDEEFDTFPTSRSAEIVRMRYDRLRSVAGRIQTVVGDLATQGERFQALLSWRDPRATFLF 230
            LDEEFD+FPTSRSAE VRMRYDRLRSVAGRIQTVVGD+A+QGERFQALL WRDPRATFLF
Sbjct: 908  LDEEFDSFPTSRSAETVRMRYDRLRSVAGRIQTVVGDMASQGERFQALLGWRDPRATFLF 967

Query: 229  VLLCLIAAVGFYAVPFQVVVALWVLYAFRPPKFRSSLPSPALSFFRRLPARADSLL 62
            V++CL AAVGFYAVP +VVVALW LY  RPPKFR+ LP  ALSFFRRLP +ADSLL
Sbjct: 968  VVMCLFAAVGFYAVPIRVVVALWGLYVMRPPKFRNKLPPRALSFFRRLPTKADSLL 1023


>ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246307 [Vitis vinifera]
          Length = 1012

 Score =  197 bits (500), Expect = 1e-48
 Identities = 98/116 (84%), Positives = 103/116 (88%)
 Frame = -2

Query: 409  LDEEFDTFPTSRSAEIVRMRYDRLRSVAGRIQTVVGDLATQGERFQALLSWRDPRATFLF 230
            LDEEFD+FPTSRSAEIVRMRYDRLRSVAGRIQTVVGD+A+QGERFQALLSWRDPRATFLF
Sbjct: 897  LDEEFDSFPTSRSAEIVRMRYDRLRSVAGRIQTVVGDMASQGERFQALLSWRDPRATFLF 956

Query: 229  VLLCLIAAVGFYAVPFQVVVALWVLYAFRPPKFRSSLPSPALSFFRRLPARADSLL 62
            V  CL AAVGFY VP + VVALW LY  RPPKFRS LPS ALSFFRRLP +ADS L
Sbjct: 957  VNFCLFAAVGFYLVPTKAVVALWGLYVLRPPKFRSKLPSRALSFFRRLPTKADSFL 1012


>emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]
          Length = 1012

 Score =  197 bits (500), Expect = 1e-48
 Identities = 98/116 (84%), Positives = 103/116 (88%)
 Frame = -2

Query: 409  LDEEFDTFPTSRSAEIVRMRYDRLRSVAGRIQTVVGDLATQGERFQALLSWRDPRATFLF 230
            LDEEFD+FPTSRSAEIVRMRYDRLRSVAGRIQTVVGD+A+QGERFQALLSWRDPRATFLF
Sbjct: 897  LDEEFDSFPTSRSAEIVRMRYDRLRSVAGRIQTVVGDMASQGERFQALLSWRDPRATFLF 956

Query: 229  VLLCLIAAVGFYAVPFQVVVALWVLYAFRPPKFRSSLPSPALSFFRRLPARADSLL 62
            V  CL AAVGFY VP + VVALW LY  RPPKFRS LPS ALSFFRRLP +ADS L
Sbjct: 957  VNFCLFAAVGFYLVPTKAVVALWGLYVLRPPKFRSKLPSRALSFFRRLPTKADSFL 1012


>ref|XP_002533623.1| conserved hypothetical protein [Ricinus communis]
            gi|223526481|gb|EEF28752.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 892

 Score =  196 bits (497), Expect = 2e-48
 Identities = 96/116 (82%), Positives = 106/116 (91%)
 Frame = -2

Query: 409  LDEEFDTFPTSRSAEIVRMRYDRLRSVAGRIQTVVGDLATQGERFQALLSWRDPRATFLF 230
            LDEEFD+FPTSRSAE+VRMRYDRLRSVAGRIQTVVGD+ATQGER QALLSWRDPRATFLF
Sbjct: 777  LDEEFDSFPTSRSAEMVRMRYDRLRSVAGRIQTVVGDMATQGERVQALLSWRDPRATFLF 836

Query: 229  VLLCLIAAVGFYAVPFQVVVALWVLYAFRPPKFRSSLPSPALSFFRRLPARADSLL 62
            V++CL AAVG YAVP +VVVALW LY  RPP+FR+ LP  AL+FFRRLPA+ADSLL
Sbjct: 837  VIMCLFAAVGCYAVPIRVVVALWGLYMLRPPRFRNKLPCRALNFFRRLPAKADSLL 892


>emb|CBI37224.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  183 bits (465), Expect = 1e-44
 Identities = 91/108 (84%), Positives = 96/108 (88%)
 Frame = -2

Query: 409  LDEEFDTFPTSRSAEIVRMRYDRLRSVAGRIQTVVGDLATQGERFQALLSWRDPRATFLF 230
            LDEEFD+FPTSRSAEIVRMRYDRLRSVAGRIQTVVGD+A+QGERFQALLSWRDPRATFLF
Sbjct: 754  LDEEFDSFPTSRSAEIVRMRYDRLRSVAGRIQTVVGDMASQGERFQALLSWRDPRATFLF 813

Query: 229  VLLCLIAAVGFYAVPFQVVVALWVLYAFRPPKFRSSLPSPALSFFRRL 86
            V  CL AAVGFY VP + VVALW LY  RPPKFRS LPS ALSFFR +
Sbjct: 814  VNFCLFAAVGFYLVPTKAVVALWGLYVLRPPKFRSKLPSRALSFFRSI 861


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