BLASTX nr result

ID: Coptis23_contig00040039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040039
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142556.1| PREDICTED: AP-5 complex subunit zeta-1-like ...   107   8e-22
gb|AFK36545.1| unknown [Lotus japonicus]                              102   3e-20
ref|XP_002281589.2| PREDICTED: protein KIAA0415-like [Vitis vini...   102   3e-20
ref|XP_002522869.1| conserved hypothetical protein [Ricinus comm...   101   7e-20
ref|XP_003607674.1| hypothetical protein MTR_4g081060 [Medicago ...   100   2e-19

>ref|XP_004142556.1| PREDICTED: AP-5 complex subunit zeta-1-like [Cucumis sativus]
           gi|449485380|ref|XP_004157150.1| PREDICTED: AP-5 complex
           subunit zeta-1-like [Cucumis sativus]
          Length = 568

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 6/79 (7%)
 Frame = +1

Query: 1   VERDRDWDFHLRSLSL------IANDPASDPSVLQHVRMLYEICKAEKSEDLVARVYPQL 162
           V+RDRDWDF+LR+LS       +ANDPASDP++LQ V+ LYE+CKAE SEDLVARVYPQ 
Sbjct: 2   VDRDRDWDFYLRTLSNSARDSNVANDPASDPNILQSVKKLYELCKAENSEDLVARVYPQF 61

Query: 163 NKLFQRSVACSSHSQTSYG 219
           NK+FQRSV+  S S+TS G
Sbjct: 62  NKIFQRSVSSLSQSRTSNG 80


>gb|AFK36545.1| unknown [Lotus japonicus]
          Length = 574

 Score =  102 bits (255), Expect = 3e-20
 Identities = 52/78 (66%), Positives = 61/78 (78%), Gaps = 6/78 (7%)
 Frame = +1

Query: 4   ERDRDWDFHLRSLSL------IANDPASDPSVLQHVRMLYEICKAEKSEDLVARVYPQLN 165
           E DR WDFHLR+LS+       ANDPASDPS+LQ V+ L+ +CKAE SEDLVARVYPQ+N
Sbjct: 4   EDDRGWDFHLRTLSISARDSNTANDPASDPSLLQSVKKLHGLCKAENSEDLVARVYPQIN 63

Query: 166 KLFQRSVACSSHSQTSYG 219
           K+FQR+VA  S SQTS G
Sbjct: 64  KIFQRAVASLSQSQTSNG 81


>ref|XP_002281589.2| PREDICTED: protein KIAA0415-like [Vitis vinifera]
           gi|297735974|emb|CBI23948.3| unnamed protein product
           [Vitis vinifera]
          Length = 569

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 6/79 (7%)
 Frame = +1

Query: 1   VERDRDWDFHLRSLSLIAND------PASDPSVLQHVRMLYEICKAEKSEDLVARVYPQL 162
           V+RD+DW+FHLRSLS  A D      PASDP++L  VR LYE+CK+E+SEDLVARVYPQ+
Sbjct: 2   VDRDKDWEFHLRSLSATARDSNFSADPASDPNLLPSVRKLYELCKSEESEDLVARVYPQI 61

Query: 163 NKLFQRSVACSSHSQTSYG 219
           NK+FQR VA  S S+TS G
Sbjct: 62  NKIFQRLVASVSQSRTSNG 80


>ref|XP_002522869.1| conserved hypothetical protein [Ricinus communis]
           gi|223537953|gb|EEF39567.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 523

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/78 (62%), Positives = 61/78 (78%), Gaps = 6/78 (7%)
 Frame = +1

Query: 4   ERDRDWDFHLRSLSL------IANDPASDPSVLQHVRMLYEICKAEKSEDLVARVYPQLN 165
           +R  DWDFHLR+LS+      +A DPASDPS+LQ VR L+E+CK E SEDL+ARVYPQ+N
Sbjct: 5   QRGGDWDFHLRTLSISARDSTLAGDPASDPSLLQSVRKLHELCKKENSEDLIARVYPQIN 64

Query: 166 KLFQRSVACSSHSQTSYG 219
           +LFQRSVA  S S ++YG
Sbjct: 65  RLFQRSVASLSQSTSAYG 82


>ref|XP_003607674.1| hypothetical protein MTR_4g081060 [Medicago truncatula]
           gi|355508729|gb|AES89871.1| hypothetical protein
           MTR_4g081060 [Medicago truncatula]
          Length = 169

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/78 (64%), Positives = 60/78 (76%), Gaps = 6/78 (7%)
 Frame = +1

Query: 4   ERDRDWDFHLRSLSL------IANDPASDPSVLQHVRMLYEICKAEKSEDLVARVYPQLN 165
           ERD  WDFHLR+LS+       ANDPASDPS+L  V+ L+E+CK E +EDLVARVYPQ+N
Sbjct: 3   ERDTGWDFHLRTLSISARDSNTANDPASDPSLLHSVKKLHELCKTENNEDLVARVYPQIN 62

Query: 166 KLFQRSVACSSHSQTSYG 219
           K+FQR+VA  S SQTS G
Sbjct: 63  KIFQRAVASLSLSQTSNG 80


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