BLASTX nr result
ID: Coptis23_contig00040030
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00040030
(299 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320961.1| predicted protein [Populus trichocarpa] gi|2... 94 9e-18
dbj|BAD73299.1| fertility restorer B-like [Oryza sativa Japonica... 93 3e-17
gb|EEE55156.1| hypothetical protein OsJ_02962 [Oryza sativa Japo... 93 3e-17
gb|EEC71248.1| hypothetical protein OsI_03217 [Oryza sativa Indi... 93 3e-17
ref|XP_002334555.1| predicted protein [Populus trichocarpa] gi|2... 92 3e-17
>ref|XP_002320961.1| predicted protein [Populus trichocarpa] gi|222861734|gb|EEE99276.1|
predicted protein [Populus trichocarpa]
Length = 474
Score = 94.4 bits (233), Expect = 9e-18
Identities = 43/97 (44%), Positives = 67/97 (69%)
Frame = -3
Query: 297 MPDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAME 118
+PD T+ T+ISGLC GR A++LFR I G++PN+++YG L+DGL + EA
Sbjct: 269 VPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFA 328
Query: 117 LFHKMEKNGLKANVVILNSIIDNMCRAGKLVEAKELF 7
LF +M+++ +K N+VI +ID++C+ GK+ + KELF
Sbjct: 329 LFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELF 365
Score = 72.8 bits (177), Expect = 3e-11
Identities = 35/96 (36%), Positives = 58/96 (60%)
Frame = -3
Query: 294 PDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAMEL 115
P T+ T+++GLCM G+++ L+ D+ VRG PNV +Y +I+ L + +EA+
Sbjct: 130 PSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGF 189
Query: 114 FHKMEKNGLKANVVILNSIIDNMCRAGKLVEAKELF 7
+MEK G NVV +++ID C G++ EA+ +F
Sbjct: 190 LKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVF 225
Score = 68.6 bits (166), Expect = 5e-10
Identities = 32/97 (32%), Positives = 62/97 (63%)
Frame = -3
Query: 297 MPDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAME 118
+P+ Y+T+I G C+ G++++AR +F + +G +PNV +Y +L++G + EA++
Sbjct: 199 VPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQ 258
Query: 117 LFHKMEKNGLKANVVILNSIIDNMCRAGKLVEAKELF 7
L + + GL ++V +II +CRAG+ + A++LF
Sbjct: 259 LLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLF 295
Score = 66.2 bits (160), Expect = 3e-09
Identities = 32/96 (33%), Positives = 54/96 (56%)
Frame = -3
Query: 294 PDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAMEL 115
P+ TY ++ GLC G +E+A LF++++ PN++ Y LID L + EL
Sbjct: 305 PNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKEL 364
Query: 114 FHKMEKNGLKANVVILNSIIDNMCRAGKLVEAKELF 7
F ++ GLK NV +++ +C+ G ++EA +LF
Sbjct: 365 FSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLF 400
Score = 55.8 bits (133), Expect = 3e-06
Identities = 29/95 (30%), Positives = 46/95 (48%)
Frame = -3
Query: 294 PDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAMEL 115
P+ TYN +I+ L G+ +A + + G PNV++Y LIDG EA +
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSV 224
Query: 114 FHKMEKNGLKANVVILNSIIDNMCRAGKLVEAKEL 10
F M G NV S+++ C+ ++ EA +L
Sbjct: 225 FDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQL 259
>dbj|BAD73299.1| fertility restorer B-like [Oryza sativa Japonica Group]
gi|56202086|dbj|BAD73615.1| fertility restorer B-like
[Oryza sativa Japonica Group]
Length = 647
Score = 92.8 bits (229), Expect = 3e-17
Identities = 42/95 (44%), Positives = 61/95 (64%)
Frame = -3
Query: 294 PDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAMEL 115
PD C+YNTVI GLC GR+ +AR LF ++ G +P V++Y LI L CF +A++L
Sbjct: 303 PDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKL 362
Query: 114 FHKMEKNGLKANVVILNSIIDNMCRAGKLVEAKEL 10
F +M + G+ NVV +S+ID +C+ G+ A EL
Sbjct: 363 FDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVEL 397
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/93 (35%), Positives = 51/93 (54%)
Frame = -3
Query: 297 MPDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAME 118
MP+ TY+++I GLC GR A +L + PN I+Y ++IDGL C +AME
Sbjct: 372 MPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAME 431
Query: 117 LFHKMEKNGLKANVVILNSIIDNMCRAGKLVEA 19
+ +M G K + + +I +C AG+ +EA
Sbjct: 432 ILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEA 464
>gb|EEE55156.1| hypothetical protein OsJ_02962 [Oryza sativa Japonica Group]
Length = 428
Score = 92.8 bits (229), Expect = 3e-17
Identities = 42/95 (44%), Positives = 61/95 (64%)
Frame = -3
Query: 294 PDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAMEL 115
PD C+YNTVI GLC GR+ +AR LF ++ G +P V++Y LI L CF +A++L
Sbjct: 41 PDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKL 100
Query: 114 FHKMEKNGLKANVVILNSIIDNMCRAGKLVEAKEL 10
F +M + G+ NVV +S+ID +C+ G+ A EL
Sbjct: 101 FDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVEL 135
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/93 (35%), Positives = 51/93 (54%)
Frame = -3
Query: 297 MPDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAME 118
MP+ TY+++I GLC GR A +L + PN I+Y ++IDGL C +AME
Sbjct: 110 MPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAME 169
Query: 117 LFHKMEKNGLKANVVILNSIIDNMCRAGKLVEA 19
+ +M G K + + +I +C AG+ +EA
Sbjct: 170 ILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEA 202
>gb|EEC71248.1| hypothetical protein OsI_03217 [Oryza sativa Indica Group]
Length = 571
Score = 92.8 bits (229), Expect = 3e-17
Identities = 42/95 (44%), Positives = 61/95 (64%)
Frame = -3
Query: 294 PDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAMEL 115
PD C+YNTVI GLC GR+ +AR LF ++ G +P V++Y LI L CF +A++L
Sbjct: 204 PDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKL 263
Query: 114 FHKMEKNGLKANVVILNSIIDNMCRAGKLVEAKEL 10
F +M + G+ NVV +S+ID +C+ G+ A EL
Sbjct: 264 FDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVEL 298
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/93 (35%), Positives = 51/93 (54%)
Frame = -3
Query: 297 MPDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAME 118
MP+ TY+++I GLC GR A +L + PN I+Y ++IDGL C +AME
Sbjct: 273 MPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAME 332
Query: 117 LFHKMEKNGLKANVVILNSIIDNMCRAGKLVEA 19
+ +M G K + + +I +C AG+ +EA
Sbjct: 333 ILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEA 365
>ref|XP_002334555.1| predicted protein [Populus trichocarpa] gi|222873072|gb|EEF10203.1|
predicted protein [Populus trichocarpa]
Length = 244
Score = 92.4 bits (228), Expect = 3e-17
Identities = 40/96 (41%), Positives = 64/96 (66%)
Frame = -3
Query: 294 PDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAMEL 115
PD TYNT+I GLC +GR+ +A+ LF+++ GN P++ +Y L+DGL +A L
Sbjct: 62 PDKVTYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRL 121
Query: 114 FHKMEKNGLKANVVILNSIIDNMCRAGKLVEAKELF 7
F M+ + LK ++V+ N ++D MC++G L +A+ELF
Sbjct: 122 FRAMQSSSLKPDLVMYNILVDAMCKSGNLKDARELF 157
Score = 66.6 bits (161), Expect = 2e-09
Identities = 32/96 (33%), Positives = 56/96 (58%)
Frame = -3
Query: 294 PDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAMEL 115
PD YN +I+G C R++ A++L+ ++ ++G +P+ ++Y LI GL EA +L
Sbjct: 27 PDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQLGRLREAQDL 86
Query: 114 FHKMEKNGLKANVVILNSIIDNMCRAGKLVEAKELF 7
F M KNG ++ + ++D +C+ G L +A LF
Sbjct: 87 FKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLF 122
Score = 61.2 bits (147), Expect = 8e-08
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = -3
Query: 294 PDNCTYNTVISGLCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAMEL 115
PD YN ++ +C G ++DAR+LF ++ V+G PNV Y +I+GL EA+E
Sbjct: 132 PDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEA 191
Query: 114 FHKMEKNGLKANVVILNSII 55
F ME++G + N II
Sbjct: 192 FRNMEEDGCPPDEFSYNVII 211
Score = 55.5 bits (132), Expect = 5e-06
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = -3
Query: 258 LCMVGRVEDARKLFRDIRVRGNSPNVISYGALIDGLFANDCFSEAMELFHKMEKNGLKAN 79
LCM V +ARKLF + +G P+V Y LI+G +A +L+++M GL +
Sbjct: 6 LCM--EVVEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPD 63
Query: 78 VVILNSIIDNMCRAGKLVEAKELF 7
V N++I +C+ G+L EA++LF
Sbjct: 64 KVTYNTLIHGLCQLGRLREAQDLF 87