BLASTX nr result

ID: Coptis23_contig00040013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040013
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77234.1| hypothetical protein VITISV_010061 [Vitis vinifera]    38   1e-05
ref|XP_002271061.2| PREDICTED: uncharacterized protein LOC100252...    37   1e-05

>emb|CAN77234.1| hypothetical protein VITISV_010061 [Vitis vinifera]
          Length = 3216

 Score = 37.7 bits (86), Expect(2) = 1e-05
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = -3

Query: 122 WSDLPWCIGGNFNVYVVRFEFVKRGRTRFTKGMQEFAD 9
           WSD PWCIGG+FN  VVRF   +    R T  M+ F++
Sbjct: 688 WSD-PWCIGGDFN--VVRFPSERSREGRLTGSMRRFSE 722



 Score = 36.2 bits (82), Expect(2) = 1e-05
 Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 6/33 (18%)
 Frame = -1

Query: 199 TGVYGPSVKSYWEHFWEELEDIRA------CIG 119
           TGVYGP++K + E FWEEL  IR       CIG
Sbjct: 663 TGVYGPTMKRHREXFWEELGAIRGLWSDPWCIG 695


>ref|XP_002271061.2| PREDICTED: uncharacterized protein LOC100252331 [Vitis vinifera]
          Length = 1031

 Score = 37.4 bits (85), Expect(2) = 1e-05
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = -3

Query: 122 WSDLPWCIGGNFNVYVVRFEFVKRGRTRFTKGMQEFAD 9
           WSD PWCIGG+FN  VVRF   +    R T  M+ F++
Sbjct: 72  WSD-PWCIGGDFN--VVRFPSDRSREGRLTGSMRRFSE 106



 Score = 36.6 bits (83), Expect(2) = 1e-05
 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
 Frame = -1

Query: 247 SFSCLIRDDDYKCLIT-TGVYGPSVKSYWEHFWEELEDIRA------CIG 119
           S SC  ++ +   L T TGVYGP++K + E FWEEL  IR       CIG
Sbjct: 30  SVSCRFKNCEDGFLWTFTGVYGPNMKRHRELFWEELGAIRGLWSDPWCIG 79


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