BLASTX nr result
ID: Coptis23_contig00040013
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00040013 (253 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN77234.1| hypothetical protein VITISV_010061 [Vitis vinifera] 38 1e-05 ref|XP_002271061.2| PREDICTED: uncharacterized protein LOC100252... 37 1e-05 >emb|CAN77234.1| hypothetical protein VITISV_010061 [Vitis vinifera] Length = 3216 Score = 37.7 bits (86), Expect(2) = 1e-05 Identities = 19/38 (50%), Positives = 24/38 (63%) Frame = -3 Query: 122 WSDLPWCIGGNFNVYVVRFEFVKRGRTRFTKGMQEFAD 9 WSD PWCIGG+FN VVRF + R T M+ F++ Sbjct: 688 WSD-PWCIGGDFN--VVRFPSERSREGRLTGSMRRFSE 722 Score = 36.2 bits (82), Expect(2) = 1e-05 Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 6/33 (18%) Frame = -1 Query: 199 TGVYGPSVKSYWEHFWEELEDIRA------CIG 119 TGVYGP++K + E FWEEL IR CIG Sbjct: 663 TGVYGPTMKRHREXFWEELGAIRGLWSDPWCIG 695 >ref|XP_002271061.2| PREDICTED: uncharacterized protein LOC100252331 [Vitis vinifera] Length = 1031 Score = 37.4 bits (85), Expect(2) = 1e-05 Identities = 19/38 (50%), Positives = 24/38 (63%) Frame = -3 Query: 122 WSDLPWCIGGNFNVYVVRFEFVKRGRTRFTKGMQEFAD 9 WSD PWCIGG+FN VVRF + R T M+ F++ Sbjct: 72 WSD-PWCIGGDFN--VVRFPSDRSREGRLTGSMRRFSE 106 Score = 36.6 bits (83), Expect(2) = 1e-05 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 7/50 (14%) Frame = -1 Query: 247 SFSCLIRDDDYKCLIT-TGVYGPSVKSYWEHFWEELEDIRA------CIG 119 S SC ++ + L T TGVYGP++K + E FWEEL IR CIG Sbjct: 30 SVSCRFKNCEDGFLWTFTGVYGPNMKRHRELFWEELGAIRGLWSDPWCIG 79