BLASTX nr result
ID: Coptis23_contig00040004
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00040004 (258 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK95966.1| unknown [Populus trichocarpa] 83 1e-27 ref|XP_002330687.1| predicted protein [Populus trichocarpa] gi|2... 83 7e-27 ref|XP_003539924.1| PREDICTED: mannan endo-1,4-beta-mannosidase ... 80 4e-26 ref|XP_003527431.1| PREDICTED: mannan endo-1,4-beta-mannosidase ... 80 4e-26 gb|ACN78665.1| endo-beta-mannanase [Malus x domestica] 76 8e-26 >gb|ABK95966.1| unknown [Populus trichocarpa] Length = 435 Score = 83.2 bits (204), Expect(2) = 1e-27 Identities = 37/47 (78%), Positives = 42/47 (89%) Frame = -3 Query: 256 KAYIKTVLTRKNSITGTEYRNDPTIFAWELMNEPRCTSDDSGNLLQN 116 K Y+KT+LTRKN+ITG EYRNDPTIFAWELMNEPRC SD SG+ LQ+ Sbjct: 185 KHYVKTLLTRKNTITGIEYRNDPTIFAWELMNEPRCMSDPSGDTLQD 231 Score = 64.7 bits (156), Expect(2) = 1e-27 Identities = 28/37 (75%), Positives = 33/37 (89%) Frame = -2 Query: 116 LQDWIEEMASFVKLIDKNHLLTVGFEGFYGSTSPEKL 6 LQDWIEEM++FVK IDKNHLLTVG EGFYG +P++L Sbjct: 229 LQDWIEEMSAFVKTIDKNHLLTVGLEGFYGPKNPKRL 265 >ref|XP_002330687.1| predicted protein [Populus trichocarpa] gi|222872291|gb|EEF09422.1| predicted protein [Populus trichocarpa] Length = 435 Score = 83.2 bits (204), Expect(2) = 7e-27 Identities = 37/47 (78%), Positives = 42/47 (89%) Frame = -3 Query: 256 KAYIKTVLTRKNSITGTEYRNDPTIFAWELMNEPRCTSDDSGNLLQN 116 K Y+KT+LTRKN+ITG EYRNDPTIFAWELMNEPRC SD SG+ LQ+ Sbjct: 185 KHYVKTLLTRKNTITGIEYRNDPTIFAWELMNEPRCMSDPSGDTLQD 231 Score = 62.4 bits (150), Expect(2) = 7e-27 Identities = 27/37 (72%), Positives = 32/37 (86%) Frame = -2 Query: 116 LQDWIEEMASFVKLIDKNHLLTVGFEGFYGSTSPEKL 6 LQDWIEEM++FVK ID NHLLTVG EGFYG +P++L Sbjct: 229 LQDWIEEMSAFVKTIDTNHLLTVGLEGFYGPKNPKRL 265 >ref|XP_003539924.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Glycine max] Length = 436 Score = 79.7 bits (195), Expect(2) = 4e-26 Identities = 34/47 (72%), Positives = 41/47 (87%) Frame = -3 Query: 256 KAYIKTVLTRKNSITGTEYRNDPTIFAWELMNEPRCTSDDSGNLLQN 116 K Y+KT+LTRKN+ITG EYRNDPTIF WEL+NEPRC +D SG+ LQ+ Sbjct: 192 KNYVKTILTRKNTITGIEYRNDPTIFGWELINEPRCLTDPSGDTLQD 238 Score = 63.2 bits (152), Expect(2) = 4e-26 Identities = 27/37 (72%), Positives = 32/37 (86%) Frame = -2 Query: 116 LQDWIEEMASFVKLIDKNHLLTVGFEGFYGSTSPEKL 6 LQDWIEEM++FVKLIDK HL+TVG EGFYG P++L Sbjct: 236 LQDWIEEMSAFVKLIDKRHLVTVGLEGFYGPNDPKRL 272 >ref|XP_003527431.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Glycine max] Length = 425 Score = 79.7 bits (195), Expect(2) = 4e-26 Identities = 34/47 (72%), Positives = 41/47 (87%) Frame = -3 Query: 256 KAYIKTVLTRKNSITGTEYRNDPTIFAWELMNEPRCTSDDSGNLLQN 116 K Y+KT+LTRKN+ITG EYRNDPTIF WEL+NEPRC +D SG+ LQ+ Sbjct: 181 KNYVKTILTRKNTITGIEYRNDPTIFGWELINEPRCLTDPSGDTLQD 227 Score = 63.2 bits (152), Expect(2) = 4e-26 Identities = 27/37 (72%), Positives = 32/37 (86%) Frame = -2 Query: 116 LQDWIEEMASFVKLIDKNHLLTVGFEGFYGSTSPEKL 6 LQDWIEEM++FVKLIDK HL+TVG EGFYG P++L Sbjct: 225 LQDWIEEMSAFVKLIDKRHLVTVGLEGFYGPNDPKRL 261 >gb|ACN78665.1| endo-beta-mannanase [Malus x domestica] Length = 443 Score = 76.3 bits (186), Expect(2) = 8e-26 Identities = 32/47 (68%), Positives = 41/47 (87%) Frame = -3 Query: 256 KAYIKTVLTRKNSITGTEYRNDPTIFAWELMNEPRCTSDDSGNLLQN 116 K Y+KT+LTRKN++ G +YRNDPTIFAWEL+NEPRC +D SG+ LQ+ Sbjct: 193 KNYVKTLLTRKNTLNGIQYRNDPTIFAWELINEPRCITDASGDTLQD 239 Score = 65.9 bits (159), Expect(2) = 8e-26 Identities = 29/37 (78%), Positives = 33/37 (89%) Frame = -2 Query: 116 LQDWIEEMASFVKLIDKNHLLTVGFEGFYGSTSPEKL 6 LQDWIEEM++FVK IDKNHLLTVG EGFYG SP++L Sbjct: 237 LQDWIEEMSAFVKAIDKNHLLTVGLEGFYGPKSPKRL 273