BLASTX nr result

ID: Coptis23_contig00040004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040004
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95966.1| unknown [Populus trichocarpa]                           83   1e-27
ref|XP_002330687.1| predicted protein [Populus trichocarpa] gi|2...    83   7e-27
ref|XP_003539924.1| PREDICTED: mannan endo-1,4-beta-mannosidase ...    80   4e-26
ref|XP_003527431.1| PREDICTED: mannan endo-1,4-beta-mannosidase ...    80   4e-26
gb|ACN78665.1| endo-beta-mannanase [Malus x domestica]                 76   8e-26

>gb|ABK95966.1| unknown [Populus trichocarpa]
          Length = 435

 Score = 83.2 bits (204), Expect(2) = 1e-27
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -3

Query: 256 KAYIKTVLTRKNSITGTEYRNDPTIFAWELMNEPRCTSDDSGNLLQN 116
           K Y+KT+LTRKN+ITG EYRNDPTIFAWELMNEPRC SD SG+ LQ+
Sbjct: 185 KHYVKTLLTRKNTITGIEYRNDPTIFAWELMNEPRCMSDPSGDTLQD 231



 Score = 64.7 bits (156), Expect(2) = 1e-27
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = -2

Query: 116 LQDWIEEMASFVKLIDKNHLLTVGFEGFYGSTSPEKL 6
           LQDWIEEM++FVK IDKNHLLTVG EGFYG  +P++L
Sbjct: 229 LQDWIEEMSAFVKTIDKNHLLTVGLEGFYGPKNPKRL 265


>ref|XP_002330687.1| predicted protein [Populus trichocarpa] gi|222872291|gb|EEF09422.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 83.2 bits (204), Expect(2) = 7e-27
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -3

Query: 256 KAYIKTVLTRKNSITGTEYRNDPTIFAWELMNEPRCTSDDSGNLLQN 116
           K Y+KT+LTRKN+ITG EYRNDPTIFAWELMNEPRC SD SG+ LQ+
Sbjct: 185 KHYVKTLLTRKNTITGIEYRNDPTIFAWELMNEPRCMSDPSGDTLQD 231



 Score = 62.4 bits (150), Expect(2) = 7e-27
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -2

Query: 116 LQDWIEEMASFVKLIDKNHLLTVGFEGFYGSTSPEKL 6
           LQDWIEEM++FVK ID NHLLTVG EGFYG  +P++L
Sbjct: 229 LQDWIEEMSAFVKTIDTNHLLTVGLEGFYGPKNPKRL 265


>ref|XP_003539924.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Glycine max]
          Length = 436

 Score = 79.7 bits (195), Expect(2) = 4e-26
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = -3

Query: 256 KAYIKTVLTRKNSITGTEYRNDPTIFAWELMNEPRCTSDDSGNLLQN 116
           K Y+KT+LTRKN+ITG EYRNDPTIF WEL+NEPRC +D SG+ LQ+
Sbjct: 192 KNYVKTILTRKNTITGIEYRNDPTIFGWELINEPRCLTDPSGDTLQD 238



 Score = 63.2 bits (152), Expect(2) = 4e-26
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -2

Query: 116 LQDWIEEMASFVKLIDKNHLLTVGFEGFYGSTSPEKL 6
           LQDWIEEM++FVKLIDK HL+TVG EGFYG   P++L
Sbjct: 236 LQDWIEEMSAFVKLIDKRHLVTVGLEGFYGPNDPKRL 272


>ref|XP_003527431.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Glycine max]
          Length = 425

 Score = 79.7 bits (195), Expect(2) = 4e-26
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = -3

Query: 256 KAYIKTVLTRKNSITGTEYRNDPTIFAWELMNEPRCTSDDSGNLLQN 116
           K Y+KT+LTRKN+ITG EYRNDPTIF WEL+NEPRC +D SG+ LQ+
Sbjct: 181 KNYVKTILTRKNTITGIEYRNDPTIFGWELINEPRCLTDPSGDTLQD 227



 Score = 63.2 bits (152), Expect(2) = 4e-26
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -2

Query: 116 LQDWIEEMASFVKLIDKNHLLTVGFEGFYGSTSPEKL 6
           LQDWIEEM++FVKLIDK HL+TVG EGFYG   P++L
Sbjct: 225 LQDWIEEMSAFVKLIDKRHLVTVGLEGFYGPNDPKRL 261


>gb|ACN78665.1| endo-beta-mannanase [Malus x domestica]
          Length = 443

 Score = 76.3 bits (186), Expect(2) = 8e-26
 Identities = 32/47 (68%), Positives = 41/47 (87%)
 Frame = -3

Query: 256 KAYIKTVLTRKNSITGTEYRNDPTIFAWELMNEPRCTSDDSGNLLQN 116
           K Y+KT+LTRKN++ G +YRNDPTIFAWEL+NEPRC +D SG+ LQ+
Sbjct: 193 KNYVKTLLTRKNTLNGIQYRNDPTIFAWELINEPRCITDASGDTLQD 239



 Score = 65.9 bits (159), Expect(2) = 8e-26
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -2

Query: 116 LQDWIEEMASFVKLIDKNHLLTVGFEGFYGSTSPEKL 6
           LQDWIEEM++FVK IDKNHLLTVG EGFYG  SP++L
Sbjct: 237 LQDWIEEMSAFVKAIDKNHLLTVGLEGFYGPKSPKRL 273


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