BLASTX nr result

ID: Coptis23_contig00039496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039496
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrol...   152   3e-35
ref|XP_002336153.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
ref|XP_002264143.2| PREDICTED: uncharacterized protein LOC100245...   144   1e-32
emb|CBI34322.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263...   143   2e-32

>ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrolase, putative [Ricinus
            communis] gi|223543923|gb|EEF45449.1| inosine-uridine
            preferring nucleoside hydrolase, putative [Ricinus
            communis]
          Length = 885

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/131 (57%), Positives = 96/131 (73%), Gaps = 2/131 (1%)
 Frame = +1

Query: 1    ESLKFKGKTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDYE--LKPSS 174
            +SL    KTPEA+FAR+LLSRLYRL + HHRYHHMD FLGEILGAV LGG ++  L    
Sbjct: 752  QSLSKTNKTPEALFARRLLSRLYRLHQAHHRYHHMDTFLGEILGAVSLGGGHDSLLNSIL 811

Query: 175  QVKPLTVLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFTELFGSKVQSAVIGSF 354
            ++K + VLA G    +G+I +DE+ G+ V++++SV+P  YY HF    G K+QSAVIGSF
Sbjct: 812  KIKRIKVLAEGVESREGEIVVDEKQGKLVRLLDSVDPTVYYNHFAWQLGVKMQSAVIGSF 871

Query: 355  DEQKRIWSMPP 387
            DEQ+RIWS  P
Sbjct: 872  DEQRRIWSTKP 882


>ref|XP_002336153.1| predicted protein [Populus trichocarpa] gi|222874439|gb|EEF11570.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  150 bits (380), Expect = 8e-35
 Identities = 77/130 (59%), Positives = 97/130 (74%), Gaps = 2/130 (1%)
 Frame = +1

Query: 4   SLKFKGK-TPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDY-ELKPSSQ 177
           SL+ K K TPE +F R+LLSRLYRL++ HHRYHHMD FLGEILGAV+L GD+ +L+P   
Sbjct: 73  SLRSKTKRTPEELFVRRLLSRLYRLKETHHRYHHMDTFLGEILGAVVLAGDHSKLEPIWL 132

Query: 178 VKPLTVLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFTELFGSKVQSAVIGSFD 357
            KP+T+LA G+   DGQ+ IDE+ G+ VKI+ESV P A+Y  F +    K QSAV+GSF 
Sbjct: 133 AKPITILAEGDESKDGQVVIDEKQGKFVKILESVEPEAHYDLFAKQLTVKKQSAVVGSFG 192

Query: 358 EQKRIWSMPP 387
           EQ+RIW  PP
Sbjct: 193 EQRRIWGAPP 202


>ref|XP_002264143.2| PREDICTED: uncharacterized protein LOC100245166 [Vitis vinifera]
          Length = 909

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/132 (54%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
 Frame = +1

Query: 1    ESLKFKGKTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDYEL-KPSSQ 177
            + L+ K +TPEA F + LLSRL +LQ+K  RYHHMD FLGEILGAV+L GD  L   + Q
Sbjct: 745  QRLEHKNQTPEAAFTQNLLSRLSQLQQKSDRYHHMDTFLGEILGAVVLAGDDPLLNQAFQ 804

Query: 178  VKPLTVLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFTELFGSKVQSAVIGSFD 357
              PL +LA G++  DGQI IDE+ GR VK++ SVN   YY HF ++  ++ QSA IG+F 
Sbjct: 805  HMPLKILANGDVKNDGQIVIDEKQGRLVKVLRSVNTTEYYDHFADVLNNQSQSARIGNFA 864

Query: 358  EQKRIWSMPPTQ 393
            EQKRIW+ PP +
Sbjct: 865  EQKRIWTTPPNR 876


>emb|CBI34322.3| unnamed protein product [Vitis vinifera]
          Length = 858

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/132 (54%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
 Frame = +1

Query: 1    ESLKFKGKTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDYEL-KPSSQ 177
            + L+ K +TPEA F + LLSRL +LQ+K  RYHHMD FLGEILGAV+L GD  L   + Q
Sbjct: 725  QRLEHKNQTPEAAFTQNLLSRLSQLQQKSDRYHHMDTFLGEILGAVVLAGDDPLLNQAFQ 784

Query: 178  VKPLTVLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFTELFGSKVQSAVIGSFD 357
              PL +LA G++  DGQI IDE+ GR VK++ SVN   YY HF ++  ++ QSA IG+F 
Sbjct: 785  HMPLKILANGDVKNDGQIVIDEKQGRLVKVLRSVNTTEYYDHFADVLNNQSQSARIGNFA 844

Query: 358  EQKRIWSMPPTQ 393
            EQKRIW+ PP +
Sbjct: 845  EQKRIWTTPPNR 856


>ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263026 [Vitis vinifera]
          Length = 1054

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/126 (56%), Positives = 90/126 (71%), Gaps = 1/126 (0%)
 Frame = +1

Query: 22   KTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDYE-LKPSSQVKPLTVL 198
            KTPEA+FAR+LLS L+ LQ+KHHRY HM  FLGEILGAV+L  D+  L  + + KP+ + 
Sbjct: 925  KTPEALFARRLLSTLHHLQEKHHRYRHMHTFLGEILGAVVLADDHSFLNATFKSKPIKLY 984

Query: 199  ATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFTELFGSKVQSAVIGSFDEQKRIWS 378
            ATG+   DGQ+ IDE+ G+ VK++  VNP AYY       G K QSAVI SF+EQKRIW+
Sbjct: 985  ATGDESMDGQLAIDEKQGKLVKLLRRVNPKAYYDLLANRLGDKKQSAVIASFEEQKRIWT 1044

Query: 379  MPPTQT 396
             PP +T
Sbjct: 1045 TPPNRT 1050


Top