BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039489
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004927561.1| nad7 (mitochondrion) [Brassica carinata] gi|...   241   6e-62
ref|YP_004927501.1| nad7 (mitochondrion) [Brassica oleracea] gi|...   241   6e-62
ref|YP_006666126.1| NADH dehydrogenase subunit 7 (mitochondrion)...   239   2e-61
ref|YP_002608197.2| NADH dehydrogenase subunit 7 [Carica papaya]...   239   2e-61
gb|ABS50636.1| NADH dehydrogenase subunit 7 [Arabidopsis thalian...   237   9e-61

>ref|YP_004927561.1| nad7 (mitochondrion) [Brassica carinata]
           gi|404481666|ref|YP_006666000.1| NADH dehydrogenase
           subunit 7 (mitochondrion) [Raphanus sativus]
           gi|335355021|gb|AEH43575.1| nad7 [Brassica carinata]
           gi|400278290|dbj|BAM36214.1| NADH dehydrogenase subunit
           7 (mitochondrion) [Raphanus sativus]
           gi|400278320|dbj|BAM36243.1| NADH dehydrogenase subunit
           7 (mitochondrion) [Raphanus sativus]
          Length = 394

 Score =  241 bits (614), Expect = 6e-62
 Identities = 113/115 (98%), Positives = 114/115 (99%)
 Frame = +1

Query: 52  PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCLNQMPSGM 231
           PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQS+RIIVQCLNQMPSGM
Sbjct: 227 PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSLRIIVQCLNQMPSGM 286

Query: 232 IKADDRKLCPPSRCRMKLSMESLIHHFELYTEGFSVPASSTYTAVEAPKGEFGVF 396
           IKADDRKLCPPSRCRMKLSMES IHHFELYTEGFSVPASSTYTAVEAPKGEFGVF
Sbjct: 287 IKADDRKLCPPSRCRMKLSMESSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVF 341


>ref|YP_004927501.1| nad7 (mitochondrion) [Brassica oleracea]
           gi|353526726|ref|YP_004927820.1| nad7 (mitochondrion)
           [Brassica rapa subsp. campestris]
           gi|353531337|ref|YP_004927723.1| nad7 (mitochondrion)
           [Brassica juncea] gi|335354914|gb|AEH43470.1| nad7
           [Brassica rapa subsp. campestris]
           gi|335354974|gb|AEH43529.1| nad7 [Brassica oleracea]
           gi|335355070|gb|AEH43623.1| nad7 [Brassica juncea]
           gi|339511266|emb|CBX48321.1| nad7 [Brassica napus]
          Length = 394

 Score =  241 bits (614), Expect = 6e-62
 Identities = 113/115 (98%), Positives = 114/115 (99%)
 Frame = +1

Query: 52  PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCLNQMPSGM 231
           PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQS+RIIVQCLNQMPSGM
Sbjct: 227 PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSLRIIVQCLNQMPSGM 286

Query: 232 IKADDRKLCPPSRCRMKLSMESLIHHFELYTEGFSVPASSTYTAVEAPKGEFGVF 396
           IKADDRKLCPPSRCRMKLSMES IHHFELYTEGFSVPASSTYTAVEAPKGEFGVF
Sbjct: 287 IKADDRKLCPPSRCRMKLSMESSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVF 341


>ref|YP_006666126.1| NADH dehydrogenase subunit 7 (mitochondrion) [Malus x domestica]
           gi|401661929|emb|CBX33385.1| NADH dehydrogenase subunit
           7 (mitochondrion) [Malus x domestica]
          Length = 394

 Score =  239 bits (610), Expect = 2e-61
 Identities = 113/115 (98%), Positives = 113/115 (98%)
 Frame = +1

Query: 52  PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCLNQMPSGM 231
           PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCLNQMPSGM
Sbjct: 227 PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCLNQMPSGM 286

Query: 232 IKADDRKLCPPSRCRMKLSMESLIHHFELYTEGFSVPASSTYTAVEAPKGEFGVF 396
           IKADDRKLCPPSRCRMKLSMES IHHFE YTEGFSVPASSTYTAVEAPKGEFGVF
Sbjct: 287 IKADDRKLCPPSRCRMKLSMESSIHHFEPYTEGFSVPASSTYTAVEAPKGEFGVF 341


>ref|YP_002608197.2| NADH dehydrogenase subunit 7 [Carica papaya]
           gi|243010640|gb|ACB20486.2| NADH dehydrogenase subunit 7
           (mitochondrion) [Carica papaya]
          Length = 394

 Score =  239 bits (609), Expect = 2e-61
 Identities = 112/115 (97%), Positives = 113/115 (98%)
 Frame = +1

Query: 52  PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCLNQMPSGM 231
           PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCLNQMPSG+
Sbjct: 227 PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCLNQMPSGL 286

Query: 232 IKADDRKLCPPSRCRMKLSMESLIHHFELYTEGFSVPASSTYTAVEAPKGEFGVF 396
           IKADDRKLCPPSRCRMKLSMES IHHFELYTEGFSVPA STYTAVEAPKGEFGVF
Sbjct: 287 IKADDRKLCPPSRCRMKLSMESSIHHFELYTEGFSVPAPSTYTAVEAPKGEFGVF 341


>gb|ABS50636.1| NADH dehydrogenase subunit 7 [Arabidopsis thaliana]
           gi|153799812|gb|ABS50637.1| NADH dehydrogenase subunit 7
           [Arabidopsis thaliana]
          Length = 360

 Score =  237 bits (604), Expect = 9e-61
 Identities = 112/115 (97%), Positives = 113/115 (98%)
 Frame = +1

Query: 52  PGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCLNQMPSGM 231
           PGVCWDSRRAAPYDVHDQSD DVPVGTRGDRYDRYCIRIEEMRQS+RIIVQCLNQMPSGM
Sbjct: 209 PGVCWDSRRAAPYDVHDQSDLDVPVGTRGDRYDRYCIRIEEMRQSLRIIVQCLNQMPSGM 268

Query: 232 IKADDRKLCPPSRCRMKLSMESLIHHFELYTEGFSVPASSTYTAVEAPKGEFGVF 396
           IKADDRKLCPPSRCRMKLSMES IHHFELYTEGFSVPASSTYTAVEAPKGEFGVF
Sbjct: 269 IKADDRKLCPPSRCRMKLSMESSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVF 323