BLASTX nr result

ID: Coptis23_contig00039460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039460
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307558.1| predicted protein [Populus trichocarpa] gi|2...   161   5e-38
ref|XP_002300871.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
emb|CBI30855.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002272948.1| PREDICTED: uncharacterized protein LOC100248...   153   2e-35
emb|CAN70161.1| hypothetical protein VITISV_030020 [Vitis vinifera]   153   2e-35

>ref|XP_002307558.1| predicted protein [Populus trichocarpa] gi|222857007|gb|EEE94554.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  161 bits (408), Expect = 5e-38
 Identities = 66/102 (64%), Positives = 88/102 (86%)
 Frame = +3

Query: 3   GLYGFIWVQALIGFLRPRRGSKQRSMWFFAHWLSGTAITILGIMNVYTGLQAYHRRTYKS 182
           GLYG +W+QAL G LRPRRGSK RS+WFF HW++GTA+++LGI+++YTGLQAYH++T +S
Sbjct: 127 GLYGIVWLQALTGLLRPRRGSKGRSLWFFVHWITGTAVSLLGIISIYTGLQAYHQKTSRS 186

Query: 183 VKLWSTLFTAEICLIVFLYLFQDKWDYLKKQGVILGSEPVKP 308
           + LW+ +FT E+  I+F YLFQDKW Y++KQGVILG EPV+P
Sbjct: 187 IHLWTIVFTTEVSFIIFFYLFQDKWVYIQKQGVILGDEPVRP 228


>ref|XP_002300871.1| predicted protein [Populus trichocarpa] gi|222842597|gb|EEE80144.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  158 bits (399), Expect = 5e-37
 Identities = 66/102 (64%), Positives = 87/102 (85%)
 Frame = +3

Query: 3   GLYGFIWVQALIGFLRPRRGSKQRSMWFFAHWLSGTAITILGIMNVYTGLQAYHRRTYKS 182
           GLYG +W+QALIGFLRPRRGSK R +WFF HW++GTA+++LGI+NVYTGLQAYH++T + 
Sbjct: 151 GLYGMVWLQALIGFLRPRRGSKGRGLWFFVHWITGTAVSLLGIVNVYTGLQAYHQKTSRR 210

Query: 183 VKLWSTLFTAEICLIVFLYLFQDKWDYLKKQGVILGSEPVKP 308
           + +W+ +FT E+  I+F YLFQDKWDY+ KQGVIL  EP++P
Sbjct: 211 IHIWTIVFTTEVSFIIFFYLFQDKWDYIHKQGVIL--EPLRP 250


>emb|CBI30855.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  153 bits (386), Expect = 2e-35
 Identities = 62/101 (61%), Positives = 86/101 (85%)
 Frame = +3

Query: 6   LYGFIWVQALIGFLRPRRGSKQRSMWFFAHWLSGTAITILGIMNVYTGLQAYHRRTYKSV 185
           LYG IWVQALIGF RP R SK RS+W+F HW+ GT ++++G++N+YTGL+AY ++T +S+
Sbjct: 83  LYGAIWVQALIGFCRPGRRSKGRSVWYFVHWILGTTVSVVGMINIYTGLEAYQKKTSRSI 142

Query: 186 KLWSTLFTAEICLIVFLYLFQDKWDYLKKQGVILGSEPVKP 308
           +LW+ LFTAE+CL+ F YLFQDKW+Y++KQGVI+G+E V P
Sbjct: 143 RLWTVLFTAEVCLMAFFYLFQDKWEYMQKQGVIMGNEAVTP 183


>ref|XP_002272948.1| PREDICTED: uncharacterized protein LOC100248593 [Vitis vinifera]
          Length = 529

 Score =  153 bits (386), Expect = 2e-35
 Identities = 62/101 (61%), Positives = 86/101 (85%)
 Frame = +3

Query: 6   LYGFIWVQALIGFLRPRRGSKQRSMWFFAHWLSGTAITILGIMNVYTGLQAYHRRTYKSV 185
           LYG IWVQALIGF RP R SK RS+W+F HW+ GT ++++G++N+YTGL+AY ++T +S+
Sbjct: 134 LYGAIWVQALIGFCRPGRRSKGRSVWYFVHWILGTTVSVVGMINIYTGLEAYQKKTSRSI 193

Query: 186 KLWSTLFTAEICLIVFLYLFQDKWDYLKKQGVILGSEPVKP 308
           +LW+ LFTAE+CL+ F YLFQDKW+Y++KQGVI+G+E V P
Sbjct: 194 RLWTVLFTAEVCLMAFFYLFQDKWEYMQKQGVIMGNEAVTP 234


>emb|CAN70161.1| hypothetical protein VITISV_030020 [Vitis vinifera]
          Length = 909

 Score =  153 bits (386), Expect = 2e-35
 Identities = 62/101 (61%), Positives = 86/101 (85%)
 Frame = +3

Query: 6   LYGFIWVQALIGFLRPRRGSKQRSMWFFAHWLSGTAITILGIMNVYTGLQAYHRRTYKSV 185
           LYG IWVQALIGF RP R SK RS+W+F HW+ GT ++++G++N+YTGL+AY ++T +S+
Sbjct: 131 LYGAIWVQALIGFCRPGRRSKGRSVWYFVHWILGTTVSVVGMINIYTGLEAYQKKTSRSI 190

Query: 186 KLWSTLFTAEICLIVFLYLFQDKWDYLKKQGVILGSEPVKP 308
           +LW+ LFTAE+CL+ F YLFQDKW+Y++KQGVI+G+E V P
Sbjct: 191 RLWTVLFTAEVCLMAFFYLFQDKWEYMQKQGVIMGNEAVTP 231


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