BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039454
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...   110   9e-23
emb|CBI40590.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_003627527.1| Pentatricopeptide repeat-containing protein ...   108   6e-22
ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi...   101   5e-20
ref|XP_002523296.1| pentatricopeptide repeat-containing protein,...   101   5e-20

>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/71 (74%), Positives = 61/71 (85%)
 Frame = -3

Query: 215 IASVLPACANLGALEMGERIEVLVREKGFAKNLFVSNALLEMYAKCGRIDKAMRVFKEIR 36
           +ASVLPACANLGALE+GERIEV  R  G+ KNL+VSNALLEMYA+CGRIDKA  VF+EI 
Sbjct: 218 LASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEID 277

Query: 35  HTKNLCSWNTM 3
             +NLCSWN+M
Sbjct: 278 GRRNLCSWNSM 288


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/71 (74%), Positives = 61/71 (85%)
 Frame = -3

Query: 215 IASVLPACANLGALEMGERIEVLVREKGFAKNLFVSNALLEMYAKCGRIDKAMRVFKEIR 36
           +ASVLPACANLGALE+GERIEV  R  G+ KNL+VSNALLEMYA+CGRIDKA  VF+EI 
Sbjct: 218 LASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEID 277

Query: 35  HTKNLCSWNTM 3
             +NLCSWN+M
Sbjct: 278 GRRNLCSWNSM 288


>ref|XP_003627527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355521549|gb|AET02003.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/71 (70%), Positives = 60/71 (84%)
 Frame = -3

Query: 215 IASVLPACANLGALEMGERIEVLVREKGFAKNLFVSNALLEMYAKCGRIDKAMRVFKEIR 36
           +ASVLPACANLGALE+G+R+EV  R+ GF KNLFV NA+LEMYAKCG+ID A +VF EI 
Sbjct: 215 LASVLPACANLGALEIGQRVEVYARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIG 274

Query: 35  HTKNLCSWNTM 3
             +NLCSWN+M
Sbjct: 275 RFRNLCSWNSM 285


>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Glycine max]
          Length = 512

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/71 (64%), Positives = 58/71 (81%)
 Frame = -3

Query: 215 IASVLPACANLGALEMGERIEVLVREKGFAKNLFVSNALLEMYAKCGRIDKAMRVFKEIR 36
           +AS+ PA ANLGALE+G+R+E   R+ GF KNL+VSNA+LEMYAKCG+ID A +VF EI 
Sbjct: 219 LASIFPAFANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIG 278

Query: 35  HTKNLCSWNTM 3
             +NLCSWN+M
Sbjct: 279 SLRNLCSWNSM 289


>ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537384|gb|EEF39012.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  101 bits (252), Expect = 5e-20
 Identities = 49/72 (68%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
 Frame = -3

Query: 215 IASVLPACANLGALEMGERIEVLVREKGFAKNLFVSNALLEMYAKCGRIDKAMRVF-KEI 39
           IAS+LPACANLGALE+G+RIE   RE G  +NL+VSNALLEMYA+CG+ID A +VF K I
Sbjct: 218 IASILPACANLGALEVGDRIETYARENGLLRNLYVSNALLEMYARCGKIDMARKVFDKII 277

Query: 38  RHTKNLCSWNTM 3
              +NLCSWN+M
Sbjct: 278 GKRRNLCSWNSM 289