BLASTX nr result

ID: Coptis23_contig00039445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039445
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...   100   1e-19
ref|XP_002298206.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                   97   1e-18
ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene [Ar...    92   4e-17

>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score =  100 bits (249), Expect = 1e-19
 Identities = 57/91 (62%), Positives = 64/91 (70%)
 Frame = +1

Query: 1    LAEVASPDKNQGCASTVISGKTIETESPTERLIKAVKSMSHKALRASVSEMYSTVSVVDM 180
            LAE  S D N G AST++SGK+  TE P ERLIK VK MS KAL ASVS++ S VS++D 
Sbjct: 1356 LAEFTSLDGNHGNASTMVSGKSSVTEQPLERLIKVVKLMSPKALSASVSDIGSVVSMIDR 1415

Query: 181  IAGSNPGNHSEARVGEDLAAMVKHSLLASNF 273
            IAGS PGN S A VGEDL AM K  L A NF
Sbjct: 1416 IAGSAPGNGSRAAVGEDLVAMTKCRLQARNF 1446


>ref|XP_002298206.1| predicted protein [Populus trichocarpa] gi|222845464|gb|EEE83011.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 55/91 (60%), Positives = 63/91 (69%)
 Frame = +1

Query: 1   LAEVASPDKNQGCASTVISGKTIETESPTERLIKAVKSMSHKALRASVSEMYSTVSVVDM 180
           LAE  SPD   G A T +SGK+   E P ER+IKAVKS+S KAL ASVS++ S VS++D 
Sbjct: 458 LAEFTSPDGAHGGALTTVSGKSNVMEQPLERMIKAVKSLSPKALSASVSDIGSVVSMIDR 517

Query: 181 IAGSNPGNHSEARVGEDLAAMVKHSLLASNF 273
           IAGS PGN S A VGEDL AM K  L A NF
Sbjct: 518 IAGSAPGNGSRAAVGEDLVAMTKCRLQARNF 548


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 57/91 (62%), Positives = 61/91 (67%)
 Frame = +1

Query: 1    LAEVASPDKNQGCASTVISGKTIETESPTERLIKAVKSMSHKALRASVSEMYSTVSVVDM 180
            LAE   PD   G A T IS K   TE P ERLIKAVKSMS KAL ASVS++ S VS++D 
Sbjct: 1091 LAEFTGPDGAHGNALTAISIKASVTEQPLERLIKAVKSMSPKALSASVSDIGSVVSMIDR 1150

Query: 181  IAGSNPGNHSEARVGEDLAAMVKHSLLASNF 273
            IAGS PGN S A VGEDL AM K  L A NF
Sbjct: 1151 IAGSAPGNGSRAAVGEDLVAMTKCRLQARNF 1181


>ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|222835956|gb|EEE74377.1|
            predicted protein [Populus trichocarpa]
          Length = 1204

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 54/91 (59%), Positives = 62/91 (68%)
 Frame = +1

Query: 1    LAEVASPDKNQGCASTVISGKTIETESPTERLIKAVKSMSHKALRASVSEMYSTVSVVDM 180
            LAE  SPD   G A T +SGK+  TE P ERLIKAVKS+S KAL ASV ++ S VS++D 
Sbjct: 890  LAEFTSPDGAHGGALTTVSGKSNVTEQPLERLIKAVKSLSPKALSASVGDIGSVVSMIDR 949

Query: 181  IAGSNPGNHSEARVGEDLAAMVKHSLLASNF 273
            IAGS PGN S A  GEDL AM K  L A N+
Sbjct: 950  IAGSAPGNGSRAAAGEDLVAMTKCRLQARNY 980


>gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene [Arabidopsis thaliana]
          Length = 1366

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/91 (58%), Positives = 63/91 (69%)
 Frame = +1

Query: 1    LAEVASPDKNQGCASTVISGKTIETESPTERLIKAVKSMSHKALRASVSEMYSTVSVVDM 180
            L E  SPD N   +ST+ SGK   TE P ERLI+AVKS+S +AL ++VS++ S VS+VD 
Sbjct: 1050 LQEFTSPDGNILNSSTITSGKPSATELPIERLIRAVKSISPQALSSAVSDIGSVVSMVDR 1109

Query: 181  IAGSNPGNHSEARVGEDLAAMVKHSLLASNF 273
            IAGS PGN S A VGEDL AM K  L A NF
Sbjct: 1110 IAGSAPGNGSRASVGEDLVAMTKCRLQARNF 1140


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