BLASTX nr result

ID: Coptis23_contig00039438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039438
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278305.1| PREDICTED: cytokinin riboside 5'-monophospha...    64   1e-08
ref|XP_004141324.1| PREDICTED: cytokinin riboside 5'-monophospha...    62   5e-08
ref|XP_003526016.1| PREDICTED: LOW QUALITY PROTEIN: cytokinin ri...    62   6e-08
ref|XP_002304002.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
gb|AFO66505.1| putative homodimerization protein [Brassica napus]      60   2e-07

>ref|XP_002278305.1| PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase
           LOG8 [Vitis vinifera] gi|147857102|emb|CAN81797.1|
           hypothetical protein VITISV_043338 [Vitis vinifera]
           gi|296081637|emb|CBI20642.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = -1

Query: 170 KTRQKSKFKTVCVFCGSSSGNKKVFSDAALDLGNELV 60
           K+  +SKFK VCVFCGS+SGN+KVFSDAAL+LGNELV
Sbjct: 4   KSNTRSKFKRVCVFCGSNSGNRKVFSDAALELGNELV 40


>ref|XP_004141324.1| PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase
           LOG8-like [Cucumis sativus]
           gi|449524597|ref|XP_004169308.1| PREDICTED: cytokinin
           riboside 5'-monophosphate phosphoribohydrolase LOG8-like
           [Cucumis sativus]
          Length = 216

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = -1

Query: 170 KTRQKSKFKTVCVFCGSSSGNKKVFSDAALDLGNELV 60
           ++  KSKF  VCVFCGS+SG++KVFSDAALDLGNELV
Sbjct: 3   ESNSKSKFNRVCVFCGSNSGHRKVFSDAALDLGNELV 39


>ref|XP_003526016.1| PREDICTED: LOW QUALITY PROTEIN: cytokinin riboside 5'-monophosphate
           phosphoribohydrolase LOG8-like [Glycine max]
          Length = 243

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/33 (81%), Positives = 32/33 (96%)
 Frame = -1

Query: 158 KSKFKTVCVFCGSSSGNKKVFSDAALDLGNELV 60
           +SKFKTVCVFCGS+SGN++VFSDAA+ LGNELV
Sbjct: 7   RSKFKTVCVFCGSNSGNRQVFSDAAIQLGNELV 39


>ref|XP_002304002.1| predicted protein [Populus trichocarpa] gi|222841434|gb|EEE78981.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -1

Query: 152 KFKTVCVFCGSSSGNKKVFSDAALDLGNELV 60
           KFK+VCVFCGS SGNKK+FSDAALDLG ELV
Sbjct: 3   KFKSVCVFCGSKSGNKKIFSDAALDLGRELV 33


>gb|AFO66505.1| putative homodimerization protein [Brassica napus]
          Length = 216

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/34 (76%), Positives = 32/34 (94%)
 Frame = -1

Query: 161 QKSKFKTVCVFCGSSSGNKKVFSDAALDLGNELV 60
           Q+S+FK VCVFCGS SGN++VFSDAA++LGNELV
Sbjct: 5   QRSRFKKVCVFCGSHSGNREVFSDAAIELGNELV 38


Top