BLASTX nr result

ID: Coptis23_contig00039432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039432
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, ...    55   4e-06
ref|XP_002271204.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    55   6e-06

>ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, partial [Vitis
           vinifera]
          Length = 244

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
 Frame = -1

Query: 259 IEKKSSHGHDKQEAD------VYVEHKSLKEG-PNTVEHSEGEENN----APLPKLGSEP 113
           +E  SS G D  E+D       Y +H+ +++  PN ++   GE++     + + +   EP
Sbjct: 1   MENPSSLGFDSDESDPDMQAEAYEDHERIEDKLPNNLDLCAGEDDKIVEQSVINREVLEP 60

Query: 112 FVGLKFCSEDLAYEFYNAYAKEKGFSIRKSHIQRSRV 2
           ++G++F S D A EFY AY +  GF++R  H +RSRV
Sbjct: 61  YIGMEFNSRDEAREFYVAYGRRTGFTVRIHHNRRSRV 97


>ref|XP_002271204.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 885

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/51 (50%), Positives = 34/51 (66%)
 Frame = -1

Query: 154 EENNAPLPKLGSEPFVGLKFCSEDLAYEFYNAYAKEKGFSIRKSHIQRSRV 2
           E N+A        P +G+ F SEDLAYEFYNAYA   GFS+RK ++ RS++
Sbjct: 264 EANSANSSVTDGVPRLGMGFDSEDLAYEFYNAYAGRVGFSVRKDYVNRSKI 314


Top