BLASTX nr result
ID: Coptis23_contig00039423
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00039423 (219 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002306917.1| SAUR family protein [Populus trichocarpa] gi... 112 4e-23 ref|XP_002889033.1| auxin-responsive family protein [Arabidopsis... 111 5e-23 gb|AAF87116.1|AC006434_12 F10A5.20 [Arabidopsis thaliana] 111 7e-23 ref|XP_002277332.1| PREDICTED: auxin-induced protein 6B-like [Vi... 111 7e-23 emb|CAN60527.1| hypothetical protein VITISV_000524 [Vitis vinifera] 111 7e-23 >ref|XP_002306917.1| SAUR family protein [Populus trichocarpa] gi|222856366|gb|EEE93913.1| SAUR family protein [Populus trichocarpa] Length = 149 Score = 112 bits (279), Expect = 4e-23 Identities = 52/71 (73%), Positives = 64/71 (90%) Frame = -2 Query: 215 SKCSKIRHIVKLRQMLKRWRHKAAMASSTTGPIPSDVPAGHVAITVGTSCRRFVVRATYL 36 +KC+KIRHIV+LRQML+RWR+KA M+++ IPSDVPAGHVA+ VGTSCRRFVVRATYL Sbjct: 6 AKCTKIRHIVRLRQMLRRWRNKARMSANR---IPSDVPAGHVAVCVGTSCRRFVVRATYL 62 Query: 35 NHPVFQTLLIQ 3 NHP+F+ LL+Q Sbjct: 63 NHPIFKKLLVQ 73 >ref|XP_002889033.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata] gi|297334874|gb|EFH65292.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata] Length = 154 Score = 111 bits (278), Expect = 5e-23 Identities = 51/70 (72%), Positives = 62/70 (88%) Frame = -2 Query: 212 KCSKIRHIVKLRQMLKRWRHKAAMASSTTGPIPSDVPAGHVAITVGTSCRRFVVRATYLN 33 KCSKIRHIV+LRQML+RWR +A M+SS + +PSDVP+GHVAI VG+SCRRFVVRATYLN Sbjct: 7 KCSKIRHIVRLRQMLRRWRDQARMSSSFSRRVPSDVPSGHVAIYVGSSCRRFVVRATYLN 66 Query: 32 HPVFQTLLIQ 3 HP+ + LL+Q Sbjct: 67 HPILRNLLVQ 76 >gb|AAF87116.1|AC006434_12 F10A5.20 [Arabidopsis thaliana] Length = 198 Score = 111 bits (277), Expect = 7e-23 Identities = 51/70 (72%), Positives = 62/70 (88%) Frame = -2 Query: 212 KCSKIRHIVKLRQMLKRWRHKAAMASSTTGPIPSDVPAGHVAITVGTSCRRFVVRATYLN 33 KCSKIRHIV+LRQML+RWR +A M+SS + +PSDVP+GHVA+ VG+SCRRFVVRATYLN Sbjct: 7 KCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVVRATYLN 66 Query: 32 HPVFQTLLIQ 3 HPV + LL+Q Sbjct: 67 HPVLRNLLVQ 76 >ref|XP_002277332.1| PREDICTED: auxin-induced protein 6B-like [Vitis vinifera] Length = 151 Score = 111 bits (277), Expect = 7e-23 Identities = 54/73 (73%), Positives = 62/73 (84%), Gaps = 1/73 (1%) Frame = -2 Query: 218 FSKCSKIRHIVKLRQMLKRWRHKAAMASSTTGP-IPSDVPAGHVAITVGTSCRRFVVRAT 42 F KCSKIRHIV+LRQML+RWRHKAA AS + IPSDVPAGHVA+ VGT +RFVVRAT Sbjct: 5 FGKCSKIRHIVRLRQMLRRWRHKAAEASRMSSSCIPSDVPAGHVAVCVGTDGKRFVVRAT 64 Query: 41 YLNHPVFQTLLIQ 3 YLNHPVF+ LL++ Sbjct: 65 YLNHPVFKKLLVE 77 >emb|CAN60527.1| hypothetical protein VITISV_000524 [Vitis vinifera] Length = 200 Score = 111 bits (277), Expect = 7e-23 Identities = 54/73 (73%), Positives = 62/73 (84%), Gaps = 1/73 (1%) Frame = -2 Query: 218 FSKCSKIRHIVKLRQMLKRWRHKAAMASSTTGP-IPSDVPAGHVAITVGTSCRRFVVRAT 42 F KCSKIRHIV+LRQML+RWRHKAA AS + IPSDVPAGHVA+ VGT +RFVVRAT Sbjct: 5 FGKCSKIRHIVRLRQMLRRWRHKAAEASRMSSSCIPSDVPAGHVAVCVGTDGKRFVVRAT 64 Query: 41 YLNHPVFQTLLIQ 3 YLNHPVF+ LL++ Sbjct: 65 YLNHPVFKKLLVE 77