BLASTX nr result

ID: Coptis23_contig00039416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039416
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307589.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
ref|XP_002272980.1| PREDICTED: uncharacterized protein LOC100244...   140   2e-31
ref|XP_002520725.1| conserved hypothetical protein [Ricinus comm...   137   2e-30
ref|NP_001234966.1| uncharacterized protein LOC100306689 [Glycin...   136   4e-30
emb|CAN61445.1| hypothetical protein VITISV_024138 [Vitis vinifera]   132   4e-29

>ref|XP_002307589.1| predicted protein [Populus trichocarpa] gi|222857038|gb|EEE94585.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  141 bits (355), Expect = 1e-31
 Identities = 74/147 (50%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
 Frame = -1

Query: 539 KTHLLNHTLSSKTSSVKLPTITFPRKRLLLRCNSKD-SYESKYXXXXXXXXXXXGFMNQL 363
           +THL         S +   +  F  K ++   NS D   ES++           G++N L
Sbjct: 27  RTHLSKPISYPHISLITSRSNRFRGKTVVFGGNSSDIPNESQFLDENGAVDDMDGYLNYL 86

Query: 362 SLEYESVWDTKPSWCQPWTITLTGVLMIVFSWXXXXXXXXXXXXXXXICAWWFIFLYSYP 183
           SLEY+SVWDTKPSWCQPWTITLTGVL+I  SW               IC WW+IFLYSYP
Sbjct: 87  SLEYDSVWDTKPSWCQPWTITLTGVLVIAGSWLILHSVVVTTIVLLLICTWWYIFLYSYP 146

Query: 182 KAYSDMIAERRKQVNSGVEDTFGFTKS 102
           K Y+DMIAERRK+V +GVEDTFG TKS
Sbjct: 147 KVYADMIAERRKRVTNGVEDTFGMTKS 173


>ref|XP_002272980.1| PREDICTED: uncharacterized protein LOC100244184 [Vitis vinifera]
           gi|296085207|emb|CBI28702.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  140 bits (353), Expect = 2e-31
 Identities = 73/146 (50%), Positives = 84/146 (57%)
 Frame = -1

Query: 539 KTHLLNHTLSSKTSSVKLPTITFPRKRLLLRCNSKDSYESKYXXXXXXXXXXXGFMNQLS 360
           +TH  N   S K SS         R+ + +  N  D  ES +           G++N LS
Sbjct: 23  QTHFSNSIFSPKISSTTRKPPISRRETVAIAANPNDPKESVFMDENGAVDDMDGYLNYLS 82

Query: 359 LEYESVWDTKPSWCQPWTITLTGVLMIVFSWXXXXXXXXXXXXXXXICAWWFIFLYSYPK 180
           LEY+SVWDTKPSWCQPWTI LTGV +I  SW               I  WW+IFLYSYPK
Sbjct: 83  LEYDSVWDTKPSWCQPWTIMLTGVSVIACSWLILHSAVITSLVLSVISLWWYIFLYSYPK 142

Query: 179 AYSDMIAERRKQVNSGVEDTFGFTKS 102
           AYSDMIAERRK+V  GVEDTFG  KS
Sbjct: 143 AYSDMIAERRKKVTRGVEDTFGLKKS 168


>ref|XP_002520725.1| conserved hypothetical protein [Ricinus communis]
           gi|223540110|gb|EEF41687.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  137 bits (344), Expect = 2e-30
 Identities = 68/145 (46%), Positives = 87/145 (60%)
 Frame = -1

Query: 539 KTHLLNHTLSSKTSSVKLPTITFPRKRLLLRCNSKDSYESKYXXXXXXXXXXXGFMNQLS 360
           +THL   +     SS  L +     K ++   NS D  ES++           G++N LS
Sbjct: 27  RTHLRKRSSWPNISSYTLNSAKIRGKTVVFGGNSSDPNESQFLDENGVVDDMDGYLNYLS 86

Query: 359 LEYESVWDTKPSWCQPWTITLTGVLMIVFSWXXXXXXXXXXXXXXXICAWWFIFLYSYPK 180
           LEY+SVWDTKPSWCQPWTI +TGV  I  SW               +C+WW+IFLYSYPK
Sbjct: 87  LEYDSVWDTKPSWCQPWTIAVTGVSGIACSWLIFHSVVVTSVVLFLVCSWWYIFLYSYPK 146

Query: 179 AYSDMIAERRKQVNSGVEDTFGFTK 105
           AY++MIAERRK+V SG EDT+G+ K
Sbjct: 147 AYAEMIAERRKKVTSGSEDTYGWKK 171


>ref|NP_001234966.1| uncharacterized protein LOC100306689 [Glycine max]
           gi|255629283|gb|ACU14986.1| unknown [Glycine max]
          Length = 166

 Score =  136 bits (342), Expect = 4e-30
 Identities = 73/148 (49%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
 Frame = -1

Query: 542 PKTHLLNHTLSSKTSSVKLPTITFPRKRLLLRCNSKDSYES-KYXXXXXXXXXXXGFMNQ 366
           P +HL   + SS TSS      T   + ++   N  DS +   +           G++N 
Sbjct: 24  PNSHLRFPSSSSVTSS------TSSNRIIVFGVNPSDSKKDPSFFDENGAVNDMEGYLNH 77

Query: 365 LSLEYESVWDTKPSWCQPWTITLTGVLMIVFSWXXXXXXXXXXXXXXXICAWWFIFLYSY 186
           LSLEY+SVWDTKPSWCQPWTI LTGV +I  SW               ICAWW+IFLYSY
Sbjct: 78  LSLEYDSVWDTKPSWCQPWTIALTGVSIIAISWLILHSVIITSLISSLICAWWYIFLYSY 137

Query: 185 PKAYSDMIAERRKQVNSGVEDTFGFTKS 102
           PKAYSDMIAERR++V +GVEDTFG  K+
Sbjct: 138 PKAYSDMIAERRERVTNGVEDTFGQKKN 165


>emb|CAN61445.1| hypothetical protein VITISV_024138 [Vitis vinifera]
          Length = 416

 Score =  132 bits (333), Expect = 4e-29
 Identities = 66/114 (57%), Positives = 72/114 (63%)
 Frame = -1

Query: 443 NSKDSYESKYXXXXXXXXXXXGFMNQLSLEYESVWDTKPSWCQPWTITLTGVLMIVFSWX 264
           N  D  ES +           G++N LSLEY+SVWDTKPSWCQPWTI LTGV  I  SW 
Sbjct: 302 NPNDPKESVFMDENGAVDDMDGYLNHLSLEYDSVWDTKPSWCQPWTIMLTGVSXIACSWL 361

Query: 263 XXXXXXXXXXXXXXICAWWFIFLYSYPKAYSDMIAERRKQVNSGVEDTFGFTKS 102
                         I  WW+IFLYSYPKAYSDMIAERRK+V SGVEDTFG  KS
Sbjct: 362 ILHSAVITSLVLSVISLWWYIFLYSYPKAYSDMIAERRKKVTSGVEDTFGLKKS 415


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